Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5401 | 16426;16427;16428 | chr2:178732975;178732974;178732973 | chr2:179597702;179597701;179597700 |
N2AB | 5084 | 15475;15476;15477 | chr2:178732975;178732974;178732973 | chr2:179597702;179597701;179597700 |
N2A | 4157 | 12694;12695;12696 | chr2:178732975;178732974;178732973 | chr2:179597702;179597701;179597700 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1349486698 | None | 0.183 | N | 0.218 | 0.083 | 0.19670166235 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs1349486698 | None | 0.183 | N | 0.218 | 0.083 | 0.19670166235 | gnomAD-4.0.0 | 6.84299E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15945E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1117 | likely_benign | 0.1153 | benign | 0.07 | Stabilizing | 0.001 | N | 0.142 | neutral | N | 0.419999745 | None | None | I |
D/C | 0.4787 | ambiguous | 0.4774 | ambiguous | -0.054 | Destabilizing | 0.983 | D | 0.198 | neutral | None | None | None | None | I |
D/E | 0.0982 | likely_benign | 0.1044 | benign | -0.263 | Destabilizing | 0.183 | N | 0.218 | neutral | N | 0.41797816 | None | None | I |
D/F | 0.4612 | ambiguous | 0.4596 | ambiguous | -0.007 | Destabilizing | 0.716 | D | 0.223 | neutral | None | None | None | None | I |
D/G | 0.1008 | likely_benign | 0.1006 | benign | -0.043 | Destabilizing | 0.101 | N | 0.294 | neutral | N | 0.384422946 | None | None | I |
D/H | 0.1738 | likely_benign | 0.1688 | benign | 0.539 | Stabilizing | 0.655 | D | 0.222 | neutral | N | 0.447533062 | None | None | I |
D/I | 0.2842 | likely_benign | 0.2853 | benign | 0.299 | Stabilizing | 0.264 | N | 0.303 | neutral | None | None | None | None | I |
D/K | 0.1976 | likely_benign | 0.195 | benign | 0.527 | Stabilizing | 0.264 | N | 0.266 | neutral | None | None | None | None | I |
D/L | 0.2563 | likely_benign | 0.2562 | benign | 0.299 | Stabilizing | 0.002 | N | 0.259 | neutral | None | None | None | None | I |
D/M | 0.4676 | ambiguous | 0.4786 | ambiguous | 0.126 | Stabilizing | 0.716 | D | 0.209 | neutral | None | None | None | None | I |
D/N | 0.0817 | likely_benign | 0.0831 | benign | 0.252 | Stabilizing | 0.002 | N | 0.169 | neutral | N | 0.419191668 | None | None | I |
D/P | 0.2496 | likely_benign | 0.2582 | benign | 0.242 | Stabilizing | 0.002 | N | 0.225 | neutral | None | None | None | None | I |
D/Q | 0.1859 | likely_benign | 0.1886 | benign | 0.266 | Stabilizing | 0.418 | N | 0.233 | neutral | None | None | None | None | I |
D/R | 0.215 | likely_benign | 0.2095 | benign | 0.707 | Stabilizing | 0.418 | N | 0.273 | neutral | None | None | None | None | I |
D/S | 0.0833 | likely_benign | 0.0848 | benign | 0.177 | Stabilizing | 0.027 | N | 0.163 | neutral | None | None | None | None | I |
D/T | 0.1699 | likely_benign | 0.1735 | benign | 0.276 | Stabilizing | 0.004 | N | 0.149 | neutral | None | None | None | None | I |
D/V | 0.1768 | likely_benign | 0.1774 | benign | 0.242 | Stabilizing | 0.101 | N | 0.24 | neutral | N | 0.479664124 | None | None | I |
D/W | 0.732 | likely_pathogenic | 0.7325 | pathogenic | 0.03 | Stabilizing | 0.983 | D | 0.217 | neutral | None | None | None | None | I |
D/Y | 0.1982 | likely_benign | 0.1921 | benign | 0.219 | Stabilizing | 0.921 | D | 0.221 | neutral | N | 0.45749934 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.