Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5405 | 16438;16439;16440 | chr2:178732963;178732962;178732961 | chr2:179597690;179597689;179597688 |
N2AB | 5088 | 15487;15488;15489 | chr2:178732963;178732962;178732961 | chr2:179597690;179597689;179597688 |
N2A | 4161 | 12706;12707;12708 | chr2:178732963;178732962;178732961 | chr2:179597690;179597689;179597688 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.171 | D | 0.444 | 0.249 | 0.449572021084 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/T | rs1165296614 | -1.564 | 0.001 | N | 0.267 | 0.405 | 0.656662538205 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 6.49351E-04 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1165296614 | -1.564 | 0.001 | N | 0.267 | 0.405 | 0.656662538205 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1165296614 | -1.564 | 0.001 | N | 0.267 | 0.405 | 0.656662538205 | gnomAD-4.0.0 | 2.56293E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 4.86287E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.237 | likely_benign | 0.2489 | benign | -1.715 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | I |
I/C | 0.687 | likely_pathogenic | 0.7154 | pathogenic | -1.115 | Destabilizing | 0.356 | N | 0.505 | neutral | None | None | None | None | I |
I/D | 0.7231 | likely_pathogenic | 0.7541 | pathogenic | -0.985 | Destabilizing | 0.072 | N | 0.591 | neutral | None | None | None | None | I |
I/E | 0.5218 | ambiguous | 0.543 | ambiguous | -0.9 | Destabilizing | 0.072 | N | 0.539 | neutral | None | None | None | None | I |
I/F | 0.137 | likely_benign | 0.1519 | benign | -1.023 | Destabilizing | 0.12 | N | 0.46 | neutral | None | None | None | None | I |
I/G | 0.5921 | likely_pathogenic | 0.6291 | pathogenic | -2.121 | Highly Destabilizing | 0.038 | N | 0.499 | neutral | None | None | None | None | I |
I/H | 0.5104 | ambiguous | 0.5455 | ambiguous | -1.348 | Destabilizing | 0.864 | D | 0.545 | neutral | None | None | None | None | I |
I/K | 0.3972 | ambiguous | 0.3998 | ambiguous | -1.152 | Destabilizing | 0.055 | N | 0.539 | neutral | N | 0.504511962 | None | None | I |
I/L | 0.1005 | likely_benign | 0.101 | benign | -0.639 | Destabilizing | None | N | 0.101 | neutral | N | 0.518532809 | None | None | I |
I/M | 0.0716 | likely_benign | 0.0717 | benign | -0.593 | Destabilizing | 0.171 | N | 0.444 | neutral | D | 0.526941648 | None | None | I |
I/N | 0.3303 | likely_benign | 0.3524 | ambiguous | -1.13 | Destabilizing | 0.356 | N | 0.621 | neutral | None | None | None | None | I |
I/P | 0.5345 | ambiguous | 0.589 | pathogenic | -0.968 | Destabilizing | None | N | 0.379 | neutral | None | None | None | None | I |
I/Q | 0.4201 | ambiguous | 0.4374 | ambiguous | -1.157 | Destabilizing | 0.356 | N | 0.585 | neutral | None | None | None | None | I |
I/R | 0.3125 | likely_benign | 0.3234 | benign | -0.743 | Destabilizing | 0.171 | N | 0.621 | neutral | D | 0.52418638 | None | None | I |
I/S | 0.2736 | likely_benign | 0.2946 | benign | -1.839 | Destabilizing | 0.016 | N | 0.394 | neutral | None | None | None | None | I |
I/T | 0.1368 | likely_benign | 0.1446 | benign | -1.616 | Destabilizing | 0.001 | N | 0.267 | neutral | N | 0.498352325 | None | None | I |
I/V | 0.0789 | likely_benign | 0.0823 | benign | -0.968 | Destabilizing | None | N | 0.139 | neutral | N | 0.513257488 | None | None | I |
I/W | 0.6859 | likely_pathogenic | 0.72 | pathogenic | -1.175 | Destabilizing | 0.864 | D | 0.581 | neutral | None | None | None | None | I |
I/Y | 0.4459 | ambiguous | 0.4857 | ambiguous | -0.904 | Destabilizing | 0.356 | N | 0.533 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.