Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5406 | 16441;16442;16443 | chr2:178732960;178732959;178732958 | chr2:179597687;179597686;179597685 |
N2AB | 5089 | 15490;15491;15492 | chr2:178732960;178732959;178732958 | chr2:179597687;179597686;179597685 |
N2A | 4162 | 12709;12710;12711 | chr2:178732960;178732959;178732958 | chr2:179597687;179597686;179597685 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.662 | N | 0.419 | 0.323 | 0.569278965934 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8586E-06 | 0 | 0 |
A/T | rs750622079 | -0.431 | 0.166 | N | 0.273 | 0.101 | 0.333651784274 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4096 | ambiguous | 0.3973 | ambiguous | -0.832 | Destabilizing | 0.991 | D | 0.375 | neutral | None | None | None | None | I |
A/D | 0.2057 | likely_benign | 0.1789 | benign | -0.487 | Destabilizing | 0.209 | N | 0.401 | neutral | None | None | None | None | I |
A/E | 0.2366 | likely_benign | 0.2122 | benign | -0.553 | Destabilizing | 0.005 | N | 0.153 | neutral | N | 0.420272756 | None | None | I |
A/F | 0.2407 | likely_benign | 0.2395 | benign | -0.836 | Destabilizing | 0.901 | D | 0.455 | neutral | None | None | None | None | I |
A/G | 0.1241 | likely_benign | 0.125 | benign | -0.804 | Destabilizing | 0.001 | N | 0.096 | neutral | N | 0.443555048 | None | None | I |
A/H | 0.3252 | likely_benign | 0.3131 | benign | -0.832 | Destabilizing | 0.004 | N | 0.341 | neutral | None | None | None | None | I |
A/I | 0.1953 | likely_benign | 0.1908 | benign | -0.251 | Destabilizing | 0.901 | D | 0.431 | neutral | None | None | None | None | I |
A/K | 0.4234 | ambiguous | 0.3906 | ambiguous | -0.881 | Destabilizing | 0.209 | N | 0.373 | neutral | None | None | None | None | I |
A/L | 0.1454 | likely_benign | 0.1438 | benign | -0.251 | Destabilizing | 0.561 | D | 0.398 | neutral | None | None | None | None | I |
A/M | 0.2023 | likely_benign | 0.1982 | benign | -0.36 | Destabilizing | 0.965 | D | 0.409 | neutral | None | None | None | None | I |
A/N | 0.1661 | likely_benign | 0.1603 | benign | -0.602 | Destabilizing | 0.561 | D | 0.415 | neutral | None | None | None | None | I |
A/P | 0.6843 | likely_pathogenic | 0.6667 | pathogenic | -0.329 | Destabilizing | 0.662 | D | 0.419 | neutral | N | 0.502987353 | None | None | I |
A/Q | 0.2834 | likely_benign | 0.2736 | benign | -0.759 | Destabilizing | 0.561 | D | 0.367 | neutral | None | None | None | None | I |
A/R | 0.3377 | likely_benign | 0.3183 | benign | -0.526 | Destabilizing | 0.004 | N | 0.243 | neutral | None | None | None | None | I |
A/S | 0.0721 | likely_benign | 0.0726 | benign | -0.948 | Destabilizing | 0.005 | N | 0.119 | neutral | N | 0.366227628 | None | None | I |
A/T | 0.0727 | likely_benign | 0.0702 | benign | -0.907 | Destabilizing | 0.166 | N | 0.273 | neutral | N | 0.366342271 | None | None | I |
A/V | 0.1114 | likely_benign | 0.109 | benign | -0.329 | Destabilizing | 0.491 | N | 0.262 | neutral | N | 0.436397002 | None | None | I |
A/W | 0.6278 | likely_pathogenic | 0.6145 | pathogenic | -1.086 | Destabilizing | 0.991 | D | 0.492 | neutral | None | None | None | None | I |
A/Y | 0.3485 | ambiguous | 0.3319 | benign | -0.693 | Destabilizing | 0.818 | D | 0.461 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.