Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5407 | 16444;16445;16446 | chr2:178732957;178732956;178732955 | chr2:179597684;179597683;179597682 |
N2AB | 5090 | 15493;15494;15495 | chr2:178732957;178732956;178732955 | chr2:179597684;179597683;179597682 |
N2A | 4163 | 12712;12713;12714 | chr2:178732957;178732956;178732955 | chr2:179597684;179597683;179597682 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs367620757 | -1.555 | 0.984 | N | 0.779 | 0.435 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
F/S | rs367620757 | -1.555 | 0.984 | N | 0.779 | 0.435 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/S | rs367620757 | -1.555 | 0.984 | N | 0.779 | 0.435 | None | gnomAD-4.0.0 | 8.67713E-06 | None | None | None | None | I | None | 1.33511E-05 | 1.66828E-05 | None | 0 | 0 | None | 0 | 0 | 1.01717E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6647 | likely_pathogenic | 0.6303 | pathogenic | -1.765 | Destabilizing | 0.919 | D | 0.744 | deleterious | None | None | None | None | I |
F/C | 0.535 | ambiguous | 0.5043 | ambiguous | -0.834 | Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.516396581 | None | None | I |
F/D | 0.9078 | likely_pathogenic | 0.8937 | pathogenic | -0.001 | Destabilizing | 0.996 | D | 0.825 | deleterious | None | None | None | None | I |
F/E | 0.9119 | likely_pathogenic | 0.9034 | pathogenic | 0.044 | Stabilizing | 0.988 | D | 0.822 | deleterious | None | None | None | None | I |
F/G | 0.8728 | likely_pathogenic | 0.8644 | pathogenic | -2.061 | Highly Destabilizing | 0.988 | D | 0.793 | deleterious | None | None | None | None | I |
F/H | 0.7442 | likely_pathogenic | 0.7161 | pathogenic | -0.453 | Destabilizing | 0.976 | D | 0.754 | deleterious | None | None | None | None | I |
F/I | 0.3813 | ambiguous | 0.344 | ambiguous | -0.918 | Destabilizing | 0.811 | D | 0.652 | neutral | N | 0.472144371 | None | None | I |
F/K | 0.9417 | likely_pathogenic | 0.9348 | pathogenic | -0.785 | Destabilizing | 0.988 | D | 0.817 | deleterious | None | None | None | None | I |
F/L | 0.8945 | likely_pathogenic | 0.8814 | pathogenic | -0.918 | Destabilizing | 0.64 | D | 0.577 | neutral | N | 0.478435625 | None | None | I |
F/M | 0.6131 | likely_pathogenic | 0.5908 | pathogenic | -0.677 | Destabilizing | 0.702 | D | 0.471 | neutral | None | None | None | None | I |
F/N | 0.7792 | likely_pathogenic | 0.7528 | pathogenic | -0.731 | Destabilizing | 0.988 | D | 0.826 | deleterious | None | None | None | None | I |
F/P | 0.9856 | likely_pathogenic | 0.9853 | pathogenic | -1.188 | Destabilizing | 0.996 | D | 0.824 | deleterious | None | None | None | None | I |
F/Q | 0.8821 | likely_pathogenic | 0.8709 | pathogenic | -0.8 | Destabilizing | 0.988 | D | 0.827 | deleterious | None | None | None | None | I |
F/R | 0.8711 | likely_pathogenic | 0.8566 | pathogenic | -0.192 | Destabilizing | 0.988 | D | 0.825 | deleterious | None | None | None | None | I |
F/S | 0.5525 | ambiguous | 0.5078 | ambiguous | -1.553 | Destabilizing | 0.984 | D | 0.779 | deleterious | N | 0.471450938 | None | None | I |
F/T | 0.6199 | likely_pathogenic | 0.5785 | pathogenic | -1.413 | Destabilizing | 0.988 | D | 0.785 | deleterious | None | None | None | None | I |
F/V | 0.3297 | likely_benign | 0.2923 | benign | -1.188 | Destabilizing | 0.811 | D | 0.664 | neutral | N | 0.483878731 | None | None | I |
F/W | 0.6278 | likely_pathogenic | 0.6275 | pathogenic | -0.319 | Destabilizing | 0.997 | D | 0.686 | prob.neutral | None | None | None | None | I |
F/Y | 0.2261 | likely_benign | 0.2133 | benign | -0.451 | Destabilizing | 0.026 | N | 0.37 | neutral | N | 0.464986326 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.