Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5410 | 16453;16454;16455 | chr2:178732948;178732947;178732946 | chr2:179597675;179597674;179597673 |
N2AB | 5093 | 15502;15503;15504 | chr2:178732948;178732947;178732946 | chr2:179597675;179597674;179597673 |
N2A | 4166 | 12721;12722;12723 | chr2:178732948;178732947;178732946 | chr2:179597675;179597674;179597673 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | None | None | 1.0 | D | 0.707 | 0.505 | 0.786423769647 | gnomAD-4.0.0 | 6.84302E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99496E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3384 | likely_benign | 0.3074 | benign | -0.489 | Destabilizing | 0.835 | D | 0.555 | neutral | N | 0.489224729 | None | None | N |
G/C | 0.5969 | likely_pathogenic | 0.5327 | ambiguous | -0.759 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.545364827 | None | None | N |
G/D | 0.4305 | ambiguous | 0.3208 | benign | -0.752 | Destabilizing | 0.071 | N | 0.433 | neutral | D | 0.524399989 | None | None | N |
G/E | 0.5027 | ambiguous | 0.3978 | ambiguous | -0.827 | Destabilizing | 0.942 | D | 0.621 | neutral | None | None | None | None | N |
G/F | 0.9021 | likely_pathogenic | 0.8827 | pathogenic | -0.883 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | N |
G/H | 0.7448 | likely_pathogenic | 0.6723 | pathogenic | -1.066 | Destabilizing | 0.351 | N | 0.594 | neutral | None | None | None | None | N |
G/I | 0.8182 | likely_pathogenic | 0.7983 | pathogenic | -0.205 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/K | 0.822 | likely_pathogenic | 0.7555 | pathogenic | -1.077 | Destabilizing | 0.991 | D | 0.629 | neutral | None | None | None | None | N |
G/L | 0.8501 | likely_pathogenic | 0.8261 | pathogenic | -0.205 | Destabilizing | 0.996 | D | 0.677 | prob.neutral | None | None | None | None | N |
G/M | 0.8077 | likely_pathogenic | 0.7777 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
G/N | 0.3707 | ambiguous | 0.3029 | benign | -0.744 | Destabilizing | 0.97 | D | 0.594 | neutral | None | None | None | None | N |
G/P | 0.978 | likely_pathogenic | 0.9729 | pathogenic | -0.259 | Destabilizing | 0.996 | D | 0.689 | prob.neutral | None | None | None | None | N |
G/Q | 0.6379 | likely_pathogenic | 0.5598 | ambiguous | -0.912 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | N |
G/R | 0.7272 | likely_pathogenic | 0.6433 | pathogenic | -0.767 | Destabilizing | 0.989 | D | 0.691 | prob.neutral | N | 0.501545767 | None | None | N |
G/S | 0.2004 | likely_benign | 0.1708 | benign | -0.981 | Destabilizing | 0.489 | N | 0.328 | neutral | D | 0.533904906 | None | None | N |
G/T | 0.4854 | ambiguous | 0.4376 | ambiguous | -0.97 | Destabilizing | 0.942 | D | 0.626 | neutral | None | None | None | None | N |
G/V | 0.6657 | likely_pathogenic | 0.6374 | pathogenic | -0.259 | Destabilizing | 0.994 | D | 0.695 | prob.neutral | N | 0.521473674 | None | None | N |
G/W | 0.813 | likely_pathogenic | 0.7662 | pathogenic | -1.236 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
G/Y | 0.7452 | likely_pathogenic | 0.6867 | pathogenic | -0.804 | Destabilizing | 0.991 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.