Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5414 | 16465;16466;16467 | chr2:178732936;178732935;178732934 | chr2:179597663;179597662;179597661 |
N2AB | 5097 | 15514;15515;15516 | chr2:178732936;178732935;178732934 | chr2:179597663;179597662;179597661 |
N2A | 4170 | 12733;12734;12735 | chr2:178732936;178732935;178732934 | chr2:179597663;179597662;179597661 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs764508505 | -3.247 | 0.997 | D | 0.893 | 0.774 | 0.910103704093 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.68312E-04 | None | 0 | None | 0 | 0 | 0 |
L/S | rs764508505 | -3.247 | 0.997 | D | 0.893 | 0.774 | 0.910103704093 | gnomAD-4.0.0 | 1.36864E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.05306E-05 | None | 0 | 0 | 0 | 0 | 0 |
L/W | rs764508505 | None | 1.0 | D | 0.874 | 0.793 | 0.90289129007 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/W | rs764508505 | None | 1.0 | D | 0.874 | 0.793 | 0.90289129007 | gnomAD-4.0.0 | 1.8594E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69529E-06 | 0 | 1.60169E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8488 | likely_pathogenic | 0.8748 | pathogenic | -2.162 | Highly Destabilizing | 0.983 | D | 0.751 | deleterious | None | None | None | None | N |
L/C | 0.8815 | likely_pathogenic | 0.9018 | pathogenic | -1.437 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -3.006 | Highly Destabilizing | 0.999 | D | 0.921 | deleterious | None | None | None | None | N |
L/E | 0.994 | likely_pathogenic | 0.9953 | pathogenic | -2.682 | Highly Destabilizing | 0.998 | D | 0.899 | deleterious | None | None | None | None | N |
L/F | 0.5491 | ambiguous | 0.6279 | pathogenic | -1.376 | Destabilizing | 0.993 | D | 0.772 | deleterious | D | 0.551159087 | None | None | N |
L/G | 0.976 | likely_pathogenic | 0.9816 | pathogenic | -2.761 | Highly Destabilizing | 0.998 | D | 0.897 | deleterious | None | None | None | None | N |
L/H | 0.9852 | likely_pathogenic | 0.9896 | pathogenic | -2.733 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/I | 0.2669 | likely_benign | 0.2793 | benign | -0.367 | Destabilizing | 0.966 | D | 0.653 | neutral | None | None | None | None | N |
L/K | 0.9911 | likely_pathogenic | 0.9928 | pathogenic | -1.592 | Destabilizing | 0.998 | D | 0.897 | deleterious | None | None | None | None | N |
L/M | 0.2083 | likely_benign | 0.2355 | benign | -0.578 | Destabilizing | 0.898 | D | 0.588 | neutral | D | 0.536030573 | None | None | N |
L/N | 0.9958 | likely_pathogenic | 0.9969 | pathogenic | -2.339 | Highly Destabilizing | 0.999 | D | 0.919 | deleterious | None | None | None | None | N |
L/P | 0.9971 | likely_pathogenic | 0.9975 | pathogenic | -0.955 | Destabilizing | 0.999 | D | 0.917 | deleterious | None | None | None | None | N |
L/Q | 0.9674 | likely_pathogenic | 0.9751 | pathogenic | -1.937 | Destabilizing | 0.998 | D | 0.919 | deleterious | None | None | None | None | N |
L/R | 0.9753 | likely_pathogenic | 0.9804 | pathogenic | -1.872 | Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
L/S | 0.9806 | likely_pathogenic | 0.9866 | pathogenic | -2.834 | Highly Destabilizing | 0.997 | D | 0.893 | deleterious | D | 0.579685049 | None | None | N |
L/T | 0.9376 | likely_pathogenic | 0.9525 | pathogenic | -2.337 | Highly Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | N |
L/V | 0.2646 | likely_benign | 0.2756 | benign | -0.955 | Destabilizing | 0.955 | D | 0.681 | prob.neutral | D | 0.555198012 | None | None | N |
L/W | 0.9478 | likely_pathogenic | 0.9697 | pathogenic | -1.822 | Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.579685049 | None | None | N |
L/Y | 0.9613 | likely_pathogenic | 0.9743 | pathogenic | -1.515 | Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.