Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5422 | 16489;16490;16491 | chr2:178732912;178732911;178732910 | chr2:179597639;179597638;179597637 |
N2AB | 5105 | 15538;15539;15540 | chr2:178732912;178732911;178732910 | chr2:179597639;179597638;179597637 |
N2A | 4178 | 12757;12758;12759 | chr2:178732912;178732911;178732910 | chr2:179597639;179597638;179597637 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs762625771 | 0.683 | 0.029 | N | 0.245 | 0.084 | 0.0297737177859 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/K | rs762625771 | 0.683 | 0.029 | N | 0.245 | 0.084 | 0.0297737177859 | gnomAD-4.0.0 | 6.00203E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25036E-06 | 0 | 3.66381E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0843 | likely_benign | 0.0967 | benign | -0.209 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | I |
N/C | 0.1806 | likely_benign | 0.204 | benign | 0.464 | Stabilizing | 0.676 | D | 0.305 | neutral | None | None | None | None | I |
N/D | 0.0775 | likely_benign | 0.0865 | benign | 0.059 | Stabilizing | 0.012 | N | 0.263 | neutral | N | 0.388385971 | None | None | I |
N/E | 0.1483 | likely_benign | 0.1809 | benign | 0.004 | Stabilizing | 0.038 | N | 0.241 | neutral | None | None | None | None | I |
N/F | 0.2875 | likely_benign | 0.3497 | ambiguous | -0.709 | Destabilizing | 0.356 | N | 0.343 | neutral | None | None | None | None | I |
N/G | 0.1127 | likely_benign | 0.1228 | benign | -0.34 | Destabilizing | 0.016 | N | 0.272 | neutral | None | None | None | None | I |
N/H | 0.0799 | likely_benign | 0.087 | benign | -0.435 | Destabilizing | 0.295 | N | 0.318 | neutral | N | 0.451610731 | None | None | I |
N/I | 0.1298 | likely_benign | 0.1578 | benign | 0.046 | Stabilizing | 0.171 | N | 0.365 | neutral | N | 0.45599783 | None | None | I |
N/K | 0.1141 | likely_benign | 0.1318 | benign | 0.163 | Stabilizing | 0.029 | N | 0.245 | neutral | N | 0.423634696 | None | None | I |
N/L | 0.1237 | likely_benign | 0.1412 | benign | 0.046 | Stabilizing | 0.038 | N | 0.363 | neutral | None | None | None | None | I |
N/M | 0.1695 | likely_benign | 0.1985 | benign | 0.378 | Stabilizing | 0.356 | N | 0.293 | neutral | None | None | None | None | I |
N/P | 0.3288 | likely_benign | 0.373 | ambiguous | -0.014 | Destabilizing | 0.072 | N | 0.355 | neutral | None | None | None | None | I |
N/Q | 0.1432 | likely_benign | 0.1624 | benign | -0.148 | Destabilizing | 0.214 | N | 0.294 | neutral | None | None | None | None | I |
N/R | 0.127 | likely_benign | 0.1494 | benign | 0.23 | Stabilizing | 0.072 | N | 0.297 | neutral | None | None | None | None | I |
N/S | 0.0547 | likely_benign | 0.0578 | benign | 0.091 | Stabilizing | None | N | 0.085 | neutral | N | 0.315619009 | None | None | I |
N/T | 0.0691 | likely_benign | 0.0759 | benign | 0.157 | Stabilizing | None | N | 0.109 | neutral | N | 0.36374103 | None | None | I |
N/V | 0.1301 | likely_benign | 0.1552 | benign | -0.014 | Destabilizing | 0.038 | N | 0.364 | neutral | None | None | None | None | I |
N/W | 0.4209 | ambiguous | 0.5016 | ambiguous | -0.778 | Destabilizing | 0.864 | D | 0.361 | neutral | None | None | None | None | I |
N/Y | 0.113 | likely_benign | 0.133 | benign | -0.483 | Destabilizing | 0.295 | N | 0.31 | neutral | N | 0.445223476 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.