Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5426 | 16501;16502;16503 | chr2:178732900;178732899;178732898 | chr2:179597627;179597626;179597625 |
N2AB | 5109 | 15550;15551;15552 | chr2:178732900;178732899;178732898 | chr2:179597627;179597626;179597625 |
N2A | 4182 | 12769;12770;12771 | chr2:178732900;178732899;178732898 | chr2:179597627;179597626;179597625 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | rs761498812 | -0.104 | None | N | 0.353 | 0.257 | 0.426787303895 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
N/I | rs761498812 | -0.104 | None | N | 0.353 | 0.257 | 0.426787303895 | gnomAD-4.0.0 | 1.59237E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85935E-06 | 0 | 0 |
N/S | rs761498812 | -0.107 | None | N | 0.123 | 0.094 | 0.115124310173 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/S | rs761498812 | -0.107 | None | N | 0.123 | 0.094 | 0.115124310173 | gnomAD-4.0.0 | 1.59237E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43369E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1675 | likely_benign | 0.1793 | benign | -0.904 | Destabilizing | 0.002 | N | 0.305 | neutral | None | None | None | None | N |
N/C | 0.2423 | likely_benign | 0.2474 | benign | 0.083 | Stabilizing | 0.245 | N | 0.527 | neutral | None | None | None | None | N |
N/D | 0.1336 | likely_benign | 0.1538 | benign | -0.386 | Destabilizing | 0.007 | N | 0.324 | neutral | N | 0.453115893 | None | None | N |
N/E | 0.266 | likely_benign | 0.323 | benign | -0.376 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | N |
N/F | 0.316 | likely_benign | 0.3554 | ambiguous | -1.139 | Destabilizing | 0.044 | N | 0.598 | neutral | None | None | None | None | N |
N/G | 0.275 | likely_benign | 0.2798 | benign | -1.13 | Destabilizing | 0.009 | N | 0.268 | neutral | None | None | None | None | N |
N/H | 0.091 | likely_benign | 0.0943 | benign | -1.119 | Destabilizing | 0.196 | N | 0.405 | neutral | N | 0.472568446 | None | None | N |
N/I | 0.1013 | likely_benign | 0.1115 | benign | -0.37 | Destabilizing | None | N | 0.353 | neutral | N | 0.434087415 | None | None | N |
N/K | 0.2038 | likely_benign | 0.2444 | benign | -0.069 | Destabilizing | None | N | 0.109 | neutral | N | 0.422752914 | None | None | N |
N/L | 0.1442 | likely_benign | 0.1555 | benign | -0.37 | Destabilizing | 0.004 | N | 0.336 | neutral | None | None | None | None | N |
N/M | 0.2186 | likely_benign | 0.2371 | benign | 0.333 | Stabilizing | 0.138 | N | 0.571 | neutral | None | None | None | None | N |
N/P | 0.4207 | ambiguous | 0.4443 | ambiguous | -0.522 | Destabilizing | 0.085 | N | 0.529 | neutral | None | None | None | None | N |
N/Q | 0.237 | likely_benign | 0.2611 | benign | -0.755 | Destabilizing | 0.044 | N | 0.353 | neutral | None | None | None | None | N |
N/R | 0.2108 | likely_benign | 0.2502 | benign | 0.041 | Stabilizing | 0.022 | N | 0.337 | neutral | None | None | None | None | N |
N/S | 0.0814 | likely_benign | 0.082 | benign | -0.54 | Destabilizing | None | N | 0.123 | neutral | N | 0.443533618 | None | None | N |
N/T | 0.1038 | likely_benign | 0.1091 | benign | -0.362 | Destabilizing | None | N | 0.139 | neutral | N | 0.417309809 | None | None | N |
N/V | 0.1252 | likely_benign | 0.1373 | benign | -0.522 | Destabilizing | None | N | 0.306 | neutral | None | None | None | None | N |
N/W | 0.6278 | likely_pathogenic | 0.6624 | pathogenic | -0.939 | Destabilizing | 0.788 | D | 0.531 | neutral | None | None | None | None | N |
N/Y | 0.1021 | likely_benign | 0.1133 | benign | -0.723 | Destabilizing | 0.065 | N | 0.606 | neutral | N | 0.482708082 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.