Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5427 | 16504;16505;16506 | chr2:178732897;178732896;178732895 | chr2:179597624;179597623;179597622 |
N2AB | 5110 | 15553;15554;15555 | chr2:178732897;178732896;178732895 | chr2:179597624;179597623;179597622 |
N2A | 4183 | 12772;12773;12774 | chr2:178732897;178732896;178732895 | chr2:179597624;179597623;179597622 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.64 | N | 0.675 | 0.476 | 0.32714864917 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
F/V | rs776697030 | -1.695 | 0.896 | N | 0.769 | 0.445 | 0.620205906853 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/V | rs776697030 | -1.695 | 0.896 | N | 0.769 | 0.445 | 0.620205906853 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/V | rs776697030 | -1.695 | 0.896 | N | 0.769 | 0.445 | 0.620205906853 | gnomAD-4.0.0 | 3.84521E-06 | None | None | None | None | N | None | 0 | 5.08837E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9735 | likely_pathogenic | 0.9812 | pathogenic | -2.383 | Highly Destabilizing | 0.919 | D | 0.804 | deleterious | None | None | None | None | N |
F/C | 0.8253 | likely_pathogenic | 0.8621 | pathogenic | -2.146 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | N | 0.488470811 | None | None | N |
F/D | 0.9975 | likely_pathogenic | 0.9983 | pathogenic | -2.791 | Highly Destabilizing | 0.996 | D | 0.881 | deleterious | None | None | None | None | N |
F/E | 0.9977 | likely_pathogenic | 0.9984 | pathogenic | -2.553 | Highly Destabilizing | 0.988 | D | 0.866 | deleterious | None | None | None | None | N |
F/G | 0.9911 | likely_pathogenic | 0.9935 | pathogenic | -2.864 | Highly Destabilizing | 0.988 | D | 0.846 | deleterious | None | None | None | None | N |
F/H | 0.956 | likely_pathogenic | 0.9641 | pathogenic | -1.9 | Destabilizing | 0.976 | D | 0.811 | deleterious | None | None | None | None | N |
F/I | 0.3749 | ambiguous | 0.4703 | ambiguous | -0.82 | Destabilizing | 0.896 | D | 0.703 | prob.neutral | N | 0.505117142 | None | None | N |
F/K | 0.9971 | likely_pathogenic | 0.9979 | pathogenic | -1.99 | Destabilizing | 0.988 | D | 0.87 | deleterious | None | None | None | None | N |
F/L | 0.9113 | likely_pathogenic | 0.943 | pathogenic | -0.82 | Destabilizing | 0.64 | D | 0.675 | prob.neutral | N | 0.476607526 | None | None | N |
F/M | 0.8239 | likely_pathogenic | 0.8704 | pathogenic | -0.925 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
F/N | 0.9878 | likely_pathogenic | 0.9917 | pathogenic | -2.55 | Highly Destabilizing | 0.988 | D | 0.886 | deleterious | None | None | None | None | N |
F/P | 0.9991 | likely_pathogenic | 0.9995 | pathogenic | -1.353 | Destabilizing | 0.996 | D | 0.882 | deleterious | None | None | None | None | N |
F/Q | 0.9951 | likely_pathogenic | 0.9963 | pathogenic | -2.358 | Highly Destabilizing | 0.996 | D | 0.887 | deleterious | None | None | None | None | N |
F/R | 0.99 | likely_pathogenic | 0.9924 | pathogenic | -1.797 | Destabilizing | 0.988 | D | 0.887 | deleterious | None | None | None | None | N |
F/S | 0.975 | likely_pathogenic | 0.9828 | pathogenic | -3.217 | Highly Destabilizing | 0.984 | D | 0.823 | deleterious | N | 0.488470811 | None | None | N |
F/T | 0.9676 | likely_pathogenic | 0.9777 | pathogenic | -2.845 | Highly Destabilizing | 0.988 | D | 0.815 | deleterious | None | None | None | None | N |
F/V | 0.4201 | ambiguous | 0.5028 | ambiguous | -1.353 | Destabilizing | 0.896 | D | 0.769 | deleterious | N | 0.464997731 | None | None | N |
F/W | 0.7441 | likely_pathogenic | 0.7786 | pathogenic | -0.332 | Destabilizing | 0.988 | D | 0.689 | prob.neutral | None | None | None | None | N |
F/Y | 0.154 | likely_benign | 0.1682 | benign | -0.667 | Destabilizing | 0.004 | N | 0.354 | neutral | N | 0.308651233 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.