Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5432 | 16519;16520;16521 | chr2:178732882;178732881;178732880 | chr2:179597609;179597608;179597607 |
N2AB | 5115 | 15568;15569;15570 | chr2:178732882;178732881;178732880 | chr2:179597609;179597608;179597607 |
N2A | 4188 | 12787;12788;12789 | chr2:178732882;178732881;178732880 | chr2:179597609;179597608;179597607 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.997 | D | 0.705 | 0.397 | 0.856718553135 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88445E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0911 | likely_benign | 0.0877 | benign | -0.684 | Destabilizing | 0.948 | D | 0.603 | neutral | N | 0.488165226 | None | None | I |
T/C | 0.5253 | ambiguous | 0.5037 | ambiguous | -0.547 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
T/D | 0.5001 | ambiguous | 0.5052 | ambiguous | -1.146 | Destabilizing | 0.983 | D | 0.648 | neutral | None | None | None | None | I |
T/E | 0.3292 | likely_benign | 0.3474 | ambiguous | -1.143 | Destabilizing | 0.611 | D | 0.413 | neutral | None | None | None | None | I |
T/F | 0.2828 | likely_benign | 0.2849 | benign | -0.871 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
T/G | 0.2895 | likely_benign | 0.2713 | benign | -0.932 | Destabilizing | 0.992 | D | 0.719 | prob.delet. | None | None | None | None | I |
T/H | 0.3239 | likely_benign | 0.3261 | benign | -1.329 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
T/I | 0.224 | likely_benign | 0.2174 | benign | -0.113 | Destabilizing | 0.998 | D | 0.714 | prob.delet. | N | 0.494966082 | None | None | I |
T/K | 0.2938 | likely_benign | 0.2938 | benign | -0.783 | Destabilizing | 0.989 | D | 0.643 | neutral | D | 0.525805498 | None | None | I |
T/L | 0.1621 | likely_benign | 0.1589 | benign | -0.113 | Destabilizing | 0.996 | D | 0.65 | neutral | None | None | None | None | I |
T/M | 0.12 | likely_benign | 0.1178 | benign | 0.303 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
T/N | 0.1916 | likely_benign | 0.1851 | benign | -0.884 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | I |
T/P | 0.8485 | likely_pathogenic | 0.8139 | pathogenic | -0.272 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | D | 0.54499966 | None | None | I |
T/Q | 0.2386 | likely_benign | 0.2331 | benign | -1.144 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | I |
T/R | 0.2036 | likely_benign | 0.2001 | benign | -0.485 | Destabilizing | 0.997 | D | 0.705 | prob.neutral | D | 0.534638412 | None | None | I |
T/S | 0.1046 | likely_benign | 0.1042 | benign | -0.998 | Destabilizing | 0.775 | D | 0.349 | neutral | N | 0.472088443 | None | None | I |
T/V | 0.1524 | likely_benign | 0.1505 | benign | -0.272 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | I |
T/W | 0.6323 | likely_pathogenic | 0.6304 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
T/Y | 0.386 | ambiguous | 0.3748 | ambiguous | -0.577 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.