Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5434 | 16525;16526;16527 | chr2:178732876;178732875;178732874 | chr2:179597603;179597602;179597601 |
N2AB | 5117 | 15574;15575;15576 | chr2:178732876;178732875;178732874 | chr2:179597603;179597602;179597601 |
N2A | 4190 | 12793;12794;12795 | chr2:178732876;178732875;178732874 | chr2:179597603;179597602;179597601 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.998 | N | 0.521 | 0.472 | 0.818133683601 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0629 | likely_benign | 0.0641 | benign | -0.184 | Destabilizing | 0.248 | N | 0.287 | neutral | N | 0.42706823 | None | None | I |
S/C | 0.172 | likely_benign | 0.1674 | benign | -0.403 | Destabilizing | 1.0 | D | 0.483 | neutral | D | 0.533582406 | None | None | I |
S/D | 0.3295 | likely_benign | 0.3691 | ambiguous | -0.093 | Destabilizing | 0.092 | N | 0.405 | neutral | None | None | None | None | I |
S/E | 0.4017 | ambiguous | 0.4516 | ambiguous | -0.205 | Destabilizing | 0.942 | D | 0.345 | neutral | None | None | None | None | I |
S/F | 0.202 | likely_benign | 0.2184 | benign | -0.934 | Destabilizing | 0.998 | D | 0.521 | neutral | N | 0.512109286 | None | None | I |
S/G | 0.0919 | likely_benign | 0.0892 | benign | -0.218 | Destabilizing | 0.871 | D | 0.396 | neutral | None | None | None | None | I |
S/H | 0.3019 | likely_benign | 0.3208 | benign | -0.558 | Destabilizing | 1.0 | D | 0.418 | neutral | None | None | None | None | I |
S/I | 0.1401 | likely_benign | 0.1474 | benign | -0.225 | Destabilizing | 0.996 | D | 0.511 | neutral | None | None | None | None | I |
S/K | 0.4941 | ambiguous | 0.5127 | ambiguous | -0.434 | Destabilizing | 0.97 | D | 0.333 | neutral | None | None | None | None | I |
S/L | 0.095 | likely_benign | 0.0973 | benign | -0.225 | Destabilizing | 0.97 | D | 0.377 | neutral | None | None | None | None | I |
S/M | 0.1916 | likely_benign | 0.1946 | benign | -0.157 | Destabilizing | 1.0 | D | 0.451 | neutral | None | None | None | None | I |
S/N | 0.1272 | likely_benign | 0.1306 | benign | -0.198 | Destabilizing | 0.97 | D | 0.367 | neutral | None | None | None | None | I |
S/P | 0.1483 | likely_benign | 0.157 | benign | -0.188 | Destabilizing | 0.994 | D | 0.402 | neutral | N | 0.467626773 | None | None | I |
S/Q | 0.3948 | ambiguous | 0.4178 | ambiguous | -0.439 | Destabilizing | 0.996 | D | 0.352 | neutral | None | None | None | None | I |
S/R | 0.3947 | ambiguous | 0.4079 | ambiguous | -0.173 | Destabilizing | 0.996 | D | 0.405 | neutral | None | None | None | None | I |
S/T | 0.077 | likely_benign | 0.08 | benign | -0.307 | Destabilizing | 0.961 | D | 0.375 | neutral | N | 0.502200706 | None | None | I |
S/V | 0.1419 | likely_benign | 0.1482 | benign | -0.188 | Destabilizing | 0.991 | D | 0.404 | neutral | None | None | None | None | I |
S/W | 0.3536 | ambiguous | 0.3791 | ambiguous | -1.015 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
S/Y | 0.1974 | likely_benign | 0.2113 | benign | -0.704 | Destabilizing | 0.998 | D | 0.524 | neutral | D | 0.523212102 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.