Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5442 | 16549;16550;16551 | chr2:178732852;178732851;178732850 | chr2:179597579;179597578;179597577 |
N2AB | 5125 | 15598;15599;15600 | chr2:178732852;178732851;178732850 | chr2:179597579;179597578;179597577 |
N2A | 4198 | 12817;12818;12819 | chr2:178732852;178732851;178732850 | chr2:179597579;179597578;179597577 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.046 | N | 0.313 | 0.344 | 0.119812018005 | gnomAD-4.0.0 | 2.05467E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70062E-06 | 0 | 0 |
G/R | None | None | 0.203 | N | 0.613 | 0.391 | 0.496364318313 | gnomAD-4.0.0 | 1.59491E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02883E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0909 | likely_benign | 0.098 | benign | -0.705 | Destabilizing | 0.046 | N | 0.313 | neutral | N | 0.381844867 | None | None | N |
G/C | 0.2579 | likely_benign | 0.2787 | benign | -1.227 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
G/D | 0.8765 | likely_pathogenic | 0.9099 | pathogenic | -0.994 | Destabilizing | 0.986 | D | 0.728 | prob.delet. | None | None | None | None | N |
G/E | 0.8763 | likely_pathogenic | 0.906 | pathogenic | -1.065 | Destabilizing | 0.982 | D | 0.745 | deleterious | N | 0.490136555 | None | None | N |
G/F | 0.8519 | likely_pathogenic | 0.8824 | pathogenic | -1.215 | Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
G/H | 0.9064 | likely_pathogenic | 0.922 | pathogenic | -1.189 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
G/I | 0.596 | likely_pathogenic | 0.6321 | pathogenic | -0.413 | Destabilizing | 0.986 | D | 0.828 | deleterious | None | None | None | None | N |
G/K | 0.9532 | likely_pathogenic | 0.9597 | pathogenic | -1.051 | Destabilizing | 0.973 | D | 0.747 | deleterious | None | None | None | None | N |
G/L | 0.6877 | likely_pathogenic | 0.7172 | pathogenic | -0.413 | Destabilizing | 0.973 | D | 0.8 | deleterious | None | None | None | None | N |
G/M | 0.7535 | likely_pathogenic | 0.7783 | pathogenic | -0.43 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
G/N | 0.8092 | likely_pathogenic | 0.8453 | pathogenic | -0.815 | Destabilizing | 0.986 | D | 0.622 | neutral | None | None | None | None | N |
G/P | 0.9872 | likely_pathogenic | 0.99 | pathogenic | -0.471 | Destabilizing | 0.993 | D | 0.759 | deleterious | None | None | None | None | N |
G/Q | 0.8686 | likely_pathogenic | 0.8843 | pathogenic | -1.024 | Destabilizing | 0.986 | D | 0.758 | deleterious | None | None | None | None | N |
G/R | 0.8645 | likely_pathogenic | 0.8804 | pathogenic | -0.75 | Destabilizing | 0.203 | N | 0.613 | neutral | N | 0.483135116 | None | None | N |
G/S | 0.1219 | likely_benign | 0.1406 | benign | -1.126 | Destabilizing | 0.386 | N | 0.379 | neutral | None | None | None | None | N |
G/T | 0.2945 | likely_benign | 0.3333 | benign | -1.106 | Destabilizing | 0.973 | D | 0.749 | deleterious | None | None | None | None | N |
G/V | 0.3815 | ambiguous | 0.4203 | ambiguous | -0.471 | Destabilizing | 0.964 | D | 0.803 | deleterious | N | 0.471658795 | None | None | N |
G/W | 0.8701 | likely_pathogenic | 0.8871 | pathogenic | -1.479 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
G/Y | 0.8506 | likely_pathogenic | 0.8784 | pathogenic | -1.063 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.