Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5446 | 16561;16562;16563 | chr2:178732840;178732839;178732838 | chr2:179597567;179597566;179597565 |
N2AB | 5129 | 15610;15611;15612 | chr2:178732840;178732839;178732838 | chr2:179597567;179597566;179597565 |
N2A | 4202 | 12829;12830;12831 | chr2:178732840;178732839;178732838 | chr2:179597567;179597566;179597565 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.977 | D | 0.736 | 0.504 | 0.741923070755 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
V/L | None | None | 0.898 | N | 0.732 | 0.339 | 0.518367700685 | gnomAD-4.0.0 | 1.37366E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80464E-06 | 0 | 0 |
V/M | rs1232217078 | None | 0.993 | D | 0.874 | 0.452 | 0.618982361579 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/M | rs1232217078 | None | 0.993 | D | 0.874 | 0.452 | 0.618982361579 | gnomAD-4.0.0 | 6.57091E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.598 | likely_pathogenic | 0.6456 | pathogenic | -1.783 | Destabilizing | 0.977 | D | 0.736 | prob.delet. | D | 0.547625644 | None | None | N |
V/C | 0.9272 | likely_pathogenic | 0.9355 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
V/D | 0.9877 | likely_pathogenic | 0.9924 | pathogenic | -1.826 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
V/E | 0.9575 | likely_pathogenic | 0.9729 | pathogenic | -1.787 | Destabilizing | 0.999 | D | 0.866 | deleterious | D | 0.548893091 | None | None | N |
V/F | 0.6182 | likely_pathogenic | 0.686 | pathogenic | -1.264 | Destabilizing | 0.995 | D | 0.866 | deleterious | None | None | None | None | N |
V/G | 0.8065 | likely_pathogenic | 0.8452 | pathogenic | -2.143 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | D | 0.548893091 | None | None | N |
V/H | 0.9835 | likely_pathogenic | 0.9896 | pathogenic | -1.645 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/I | 0.0816 | likely_benign | 0.0809 | benign | -0.865 | Destabilizing | 0.15 | N | 0.547 | neutral | None | None | None | None | N |
V/K | 0.9589 | likely_pathogenic | 0.9737 | pathogenic | -1.428 | Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | N |
V/L | 0.3842 | ambiguous | 0.403 | ambiguous | -0.865 | Destabilizing | 0.898 | D | 0.732 | prob.delet. | N | 0.501110785 | None | None | N |
V/M | 0.4525 | ambiguous | 0.4986 | ambiguous | -0.723 | Destabilizing | 0.993 | D | 0.874 | deleterious | D | 0.530281857 | None | None | N |
V/N | 0.9486 | likely_pathogenic | 0.9652 | pathogenic | -1.289 | Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
V/P | 0.9025 | likely_pathogenic | 0.9287 | pathogenic | -1.139 | Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
V/Q | 0.9359 | likely_pathogenic | 0.955 | pathogenic | -1.437 | Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
V/R | 0.9263 | likely_pathogenic | 0.9492 | pathogenic | -0.932 | Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
V/S | 0.8094 | likely_pathogenic | 0.8565 | pathogenic | -1.847 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
V/T | 0.6722 | likely_pathogenic | 0.732 | pathogenic | -1.701 | Destabilizing | 0.983 | D | 0.811 | deleterious | None | None | None | None | N |
V/W | 0.9859 | likely_pathogenic | 0.9909 | pathogenic | -1.495 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/Y | 0.9562 | likely_pathogenic | 0.9699 | pathogenic | -1.215 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.