Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5450 | 16573;16574;16575 | chr2:178732713;178732712;178732711 | chr2:179597440;179597439;179597438 |
N2AB | 5133 | 15622;15623;15624 | chr2:178732713;178732712;178732711 | chr2:179597440;179597439;179597438 |
N2A | 4206 | 12841;12842;12843 | chr2:178732713;178732712;178732711 | chr2:179597440;179597439;179597438 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs763896243 | -1.491 | 0.998 | D | 0.804 | 0.626 | 0.699586999277 | gnomAD-2.1.1 | 4.41E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.91E-05 | None | 0 | 0 | 0 |
P/A | rs763896243 | -1.491 | 0.998 | D | 0.804 | 0.626 | 0.699586999277 | gnomAD-4.0.0 | 1.39204E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.43659E-05 | 0 |
P/S | None | None | 1.0 | D | 0.889 | 0.627 | 0.705942088615 | gnomAD-4.0.0 | 6.96022E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.09149E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3589 | ambiguous | 0.5029 | ambiguous | -1.511 | Destabilizing | 0.998 | D | 0.804 | deleterious | D | 0.640461459 | None | None | N |
P/C | 0.9297 | likely_pathogenic | 0.9622 | pathogenic | -1.37 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
P/D | 0.9959 | likely_pathogenic | 0.9981 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/E | 0.9866 | likely_pathogenic | 0.9936 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/F | 0.9843 | likely_pathogenic | 0.9937 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
P/G | 0.9369 | likely_pathogenic | 0.9677 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
P/H | 0.9776 | likely_pathogenic | 0.9904 | pathogenic | -1.361 | Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.641066872 | None | None | N |
P/I | 0.8599 | likely_pathogenic | 0.9217 | pathogenic | -0.622 | Destabilizing | 0.998 | D | 0.87 | deleterious | None | None | None | None | N |
P/K | 0.9902 | likely_pathogenic | 0.9954 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/L | 0.6917 | likely_pathogenic | 0.8002 | pathogenic | -0.622 | Destabilizing | 0.64 | D | 0.756 | deleterious | D | 0.640865068 | None | None | N |
P/M | 0.9492 | likely_pathogenic | 0.9736 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
P/N | 0.9923 | likely_pathogenic | 0.9967 | pathogenic | -0.949 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/Q | 0.9676 | likely_pathogenic | 0.9842 | pathogenic | -1.034 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/R | 0.9629 | likely_pathogenic | 0.9809 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.641066872 | None | None | N |
P/S | 0.8575 | likely_pathogenic | 0.9343 | pathogenic | -1.647 | Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.640663263 | None | None | N |
P/T | 0.8298 | likely_pathogenic | 0.9145 | pathogenic | -1.472 | Destabilizing | 0.999 | D | 0.879 | deleterious | D | 0.640865068 | None | None | N |
P/V | 0.7142 | likely_pathogenic | 0.8148 | pathogenic | -0.884 | Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
P/W | 0.9965 | likely_pathogenic | 0.9987 | pathogenic | -1.256 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
P/Y | 0.991 | likely_pathogenic | 0.9964 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.