Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5456 | 16591;16592;16593 | chr2:178732695;178732694;178732693 | chr2:179597422;179597421;179597420 |
N2AB | 5139 | 15640;15641;15642 | chr2:178732695;178732694;178732693 | chr2:179597422;179597421;179597420 |
N2A | 4212 | 12859;12860;12861 | chr2:178732695;178732694;178732693 | chr2:179597422;179597421;179597420 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.992 | N | 0.603 | 0.465 | 0.385578977469 | gnomAD-4.0.0 | 2.07547E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71771E-06 | 0 | 0 |
P/L | rs876658041 | 0.323 | 0.999 | N | 0.863 | 0.43 | 0.629443713816 | gnomAD-2.1.1 | 4.27E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.33E-06 | 0 |
P/L | rs876658041 | 0.323 | 0.999 | N | 0.863 | 0.43 | 0.629443713816 | gnomAD-4.0.0 | 1.63298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.92422E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2026 | likely_benign | 0.2152 | benign | -1.441 | Destabilizing | 0.992 | D | 0.603 | neutral | N | 0.511958614 | None | None | N |
P/C | 0.8653 | likely_pathogenic | 0.8792 | pathogenic | -1.217 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
P/D | 0.9502 | likely_pathogenic | 0.9593 | pathogenic | -0.604 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
P/E | 0.8533 | likely_pathogenic | 0.8698 | pathogenic | -0.563 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
P/F | 0.8864 | likely_pathogenic | 0.9054 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/G | 0.778 | likely_pathogenic | 0.7878 | pathogenic | -1.801 | Destabilizing | 0.997 | D | 0.739 | prob.delet. | None | None | None | None | N |
P/H | 0.854 | likely_pathogenic | 0.872 | pathogenic | -1.29 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.524746951 | None | None | N |
P/I | 0.5118 | ambiguous | 0.5317 | ambiguous | -0.542 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
P/K | 0.928 | likely_pathogenic | 0.9364 | pathogenic | -0.937 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
P/L | 0.2159 | likely_benign | 0.2504 | benign | -0.542 | Destabilizing | 0.999 | D | 0.863 | deleterious | N | 0.492868281 | None | None | N |
P/M | 0.5961 | likely_pathogenic | 0.6233 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/N | 0.9183 | likely_pathogenic | 0.9309 | pathogenic | -0.775 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
P/Q | 0.783 | likely_pathogenic | 0.7965 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/R | 0.8466 | likely_pathogenic | 0.8614 | pathogenic | -0.615 | Destabilizing | 0.999 | D | 0.863 | deleterious | D | 0.524239972 | None | None | N |
P/S | 0.6776 | likely_pathogenic | 0.695 | pathogenic | -1.498 | Destabilizing | 0.957 | D | 0.421 | neutral | N | 0.497488437 | None | None | N |
P/T | 0.3943 | ambiguous | 0.4296 | ambiguous | -1.322 | Destabilizing | 0.999 | D | 0.776 | deleterious | N | 0.499134278 | None | None | N |
P/V | 0.398 | ambiguous | 0.4158 | ambiguous | -0.807 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
P/W | 0.9634 | likely_pathogenic | 0.971 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
P/Y | 0.9278 | likely_pathogenic | 0.9423 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.