Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5466 | 16621;16622;16623 | chr2:178732665;178732664;178732663 | chr2:179597392;179597391;179597390 |
N2AB | 5149 | 15670;15671;15672 | chr2:178732665;178732664;178732663 | chr2:179597392;179597391;179597390 |
N2A | 4222 | 12889;12890;12891 | chr2:178732665;178732664;178732663 | chr2:179597392;179597391;179597390 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.001 | N | 0.101 | 0.063 | 0.0846915920261 | gnomAD-4.0.0 | 1.37218E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80233E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4327 | ambiguous | 0.4566 | ambiguous | -0.723 | Destabilizing | 0.973 | D | 0.456 | neutral | None | None | None | None | I |
A/D | 0.2068 | likely_benign | 0.2495 | benign | 0.031 | Stabilizing | 0.826 | D | 0.478 | neutral | None | None | None | None | I |
A/E | 0.1772 | likely_benign | 0.2227 | benign | -0.047 | Destabilizing | 0.505 | D | 0.425 | neutral | N | 0.422863904 | None | None | I |
A/F | 0.2149 | likely_benign | 0.249 | benign | -0.606 | Destabilizing | 0.826 | D | 0.563 | neutral | None | None | None | None | I |
A/G | 0.1351 | likely_benign | 0.1482 | benign | -0.5 | Destabilizing | 0.505 | D | 0.375 | neutral | N | 0.466636111 | None | None | I |
A/H | 0.2998 | likely_benign | 0.3469 | ambiguous | -0.428 | Destabilizing | 0.991 | D | 0.544 | neutral | None | None | None | None | I |
A/I | 0.1464 | likely_benign | 0.1721 | benign | -0.089 | Destabilizing | 0.189 | N | 0.387 | neutral | None | None | None | None | I |
A/K | 0.2271 | likely_benign | 0.2821 | benign | -0.577 | Destabilizing | 0.575 | D | 0.419 | neutral | None | None | None | None | I |
A/L | 0.1214 | likely_benign | 0.1349 | benign | -0.089 | Destabilizing | 0.218 | N | 0.432 | neutral | None | None | None | None | I |
A/M | 0.1466 | likely_benign | 0.1624 | benign | -0.33 | Destabilizing | 0.826 | D | 0.509 | neutral | None | None | None | None | I |
A/N | 0.1611 | likely_benign | 0.1748 | benign | -0.316 | Destabilizing | 0.826 | D | 0.539 | neutral | None | None | None | None | I |
A/P | 0.1177 | likely_benign | 0.1271 | benign | -0.134 | Destabilizing | 0.879 | D | 0.471 | neutral | N | 0.396832096 | None | None | I |
A/Q | 0.231 | likely_benign | 0.2704 | benign | -0.448 | Destabilizing | 0.906 | D | 0.515 | neutral | None | None | None | None | I |
A/R | 0.2015 | likely_benign | 0.2476 | benign | -0.27 | Destabilizing | 0.826 | D | 0.492 | neutral | None | None | None | None | I |
A/S | 0.0829 | likely_benign | 0.084 | benign | -0.683 | Destabilizing | 0.174 | N | 0.422 | neutral | N | 0.351366379 | None | None | I |
A/T | 0.0675 | likely_benign | 0.0672 | benign | -0.65 | Destabilizing | 0.001 | N | 0.101 | neutral | N | 0.363564885 | None | None | I |
A/V | 0.0904 | likely_benign | 0.1026 | benign | -0.134 | Destabilizing | 0.003 | N | 0.209 | neutral | N | 0.441855097 | None | None | I |
A/W | 0.5309 | ambiguous | 0.5971 | pathogenic | -0.829 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | I |
A/Y | 0.3137 | likely_benign | 0.3532 | ambiguous | -0.434 | Destabilizing | 0.906 | D | 0.565 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.