Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5467 | 16624;16625;16626 | chr2:178732662;178732661;178732660 | chr2:179597389;179597388;179597387 |
N2AB | 5150 | 15673;15674;15675 | chr2:178732662;178732661;178732660 | chr2:179597389;179597388;179597387 |
N2A | 4223 | 12892;12893;12894 | chr2:178732662;178732661;178732660 | chr2:179597389;179597388;179597387 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.942 | N | 0.811 | 0.286 | 0.720981639776 | gnomAD-4.0.0 | 1.59912E-06 | None | None | None | None | N | None | 5.69411E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1777 | likely_benign | 0.2139 | benign | -1.905 | Destabilizing | 0.822 | D | 0.531 | neutral | N | 0.496825732 | None | None | N |
V/C | 0.7995 | likely_pathogenic | 0.8315 | pathogenic | -1.311 | Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | N |
V/D | 0.6614 | likely_pathogenic | 0.8255 | pathogenic | -1.864 | Destabilizing | 0.99 | D | 0.817 | deleterious | D | 0.524851267 | None | None | N |
V/E | 0.5704 | likely_pathogenic | 0.7336 | pathogenic | -1.684 | Destabilizing | 0.993 | D | 0.803 | deleterious | None | None | None | None | N |
V/F | 0.173 | likely_benign | 0.2486 | benign | -1.133 | Destabilizing | 0.942 | D | 0.811 | deleterious | N | 0.479880118 | None | None | N |
V/G | 0.3234 | likely_benign | 0.4148 | ambiguous | -2.395 | Highly Destabilizing | 0.971 | D | 0.802 | deleterious | N | 0.497846242 | None | None | N |
V/H | 0.7963 | likely_pathogenic | 0.8902 | pathogenic | -1.844 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
V/I | 0.0803 | likely_benign | 0.0835 | benign | -0.566 | Destabilizing | 0.014 | N | 0.237 | neutral | N | 0.47208479 | None | None | N |
V/K | 0.7061 | likely_pathogenic | 0.8384 | pathogenic | -1.555 | Destabilizing | 0.978 | D | 0.806 | deleterious | None | None | None | None | N |
V/L | 0.2058 | likely_benign | 0.2649 | benign | -0.566 | Destabilizing | 0.247 | N | 0.477 | neutral | N | 0.496017656 | None | None | N |
V/M | 0.187 | likely_benign | 0.2317 | benign | -0.523 | Destabilizing | 0.956 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/N | 0.5568 | ambiguous | 0.7139 | pathogenic | -1.71 | Destabilizing | 0.993 | D | 0.836 | deleterious | None | None | None | None | N |
V/P | 0.8111 | likely_pathogenic | 0.9028 | pathogenic | -0.983 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | N |
V/Q | 0.6107 | likely_pathogenic | 0.7468 | pathogenic | -1.611 | Destabilizing | 0.993 | D | 0.825 | deleterious | None | None | None | None | N |
V/R | 0.6252 | likely_pathogenic | 0.7745 | pathogenic | -1.317 | Destabilizing | 0.993 | D | 0.835 | deleterious | None | None | None | None | N |
V/S | 0.3262 | likely_benign | 0.4353 | ambiguous | -2.378 | Highly Destabilizing | 0.978 | D | 0.785 | deleterious | None | None | None | None | N |
V/T | 0.2536 | likely_benign | 0.3278 | benign | -2.047 | Highly Destabilizing | 0.86 | D | 0.675 | neutral | None | None | None | None | N |
V/W | 0.8655 | likely_pathogenic | 0.9319 | pathogenic | -1.471 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
V/Y | 0.6334 | likely_pathogenic | 0.7605 | pathogenic | -1.119 | Destabilizing | 0.978 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.