Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5472 | 16639;16640;16641 | chr2:178732647;178732646;178732645 | chr2:179597374;179597373;179597372 |
N2AB | 5155 | 15688;15689;15690 | chr2:178732647;178732646;178732645 | chr2:179597374;179597373;179597372 |
N2A | 4228 | 12907;12908;12909 | chr2:178732647;178732646;178732645 | chr2:179597374;179597373;179597372 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs911246876 | None | 0.062 | N | 0.522 | 0.171 | 0.348101942276 | gnomAD-4.0.0 | 1.59357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02792E-05 |
T/S | rs911246876 | None | 0.005 | N | 0.192 | 0.073 | 0.260249123532 | gnomAD-4.0.0 | 1.59357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78133E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0684 | likely_benign | 0.0699 | benign | -1.201 | Destabilizing | None | N | 0.177 | neutral | N | 0.4540414 | None | None | N |
T/C | 0.3429 | ambiguous | 0.3383 | benign | -0.792 | Destabilizing | 0.555 | D | 0.534 | neutral | None | None | None | None | N |
T/D | 0.2919 | likely_benign | 0.3388 | benign | -0.324 | Destabilizing | 0.149 | N | 0.525 | neutral | None | None | None | None | N |
T/E | 0.2431 | likely_benign | 0.2709 | benign | -0.259 | Destabilizing | 0.149 | N | 0.485 | neutral | None | None | None | None | N |
T/F | 0.1862 | likely_benign | 0.1953 | benign | -1.15 | Destabilizing | 0.38 | N | 0.584 | neutral | None | None | None | None | N |
T/G | 0.21 | likely_benign | 0.212 | benign | -1.497 | Destabilizing | 0.035 | N | 0.521 | neutral | None | None | None | None | N |
T/H | 0.1854 | likely_benign | 0.1899 | benign | -1.622 | Destabilizing | 0.935 | D | 0.579 | neutral | None | None | None | None | N |
T/I | 0.1148 | likely_benign | 0.1233 | benign | -0.476 | Destabilizing | 0.062 | N | 0.522 | neutral | N | 0.411445416 | None | None | N |
T/K | 0.1433 | likely_benign | 0.1527 | benign | -0.562 | Destabilizing | 0.149 | N | 0.485 | neutral | None | None | None | None | N |
T/L | 0.0979 | likely_benign | 0.1007 | benign | -0.476 | Destabilizing | 0.012 | N | 0.458 | neutral | None | None | None | None | N |
T/M | 0.0987 | likely_benign | 0.0986 | benign | -0.262 | Destabilizing | 0.005 | N | 0.352 | neutral | None | None | None | None | N |
T/N | 0.1091 | likely_benign | 0.1153 | benign | -0.679 | Destabilizing | 0.117 | N | 0.498 | neutral | N | 0.464546395 | None | None | N |
T/P | 0.2787 | likely_benign | 0.3158 | benign | -0.687 | Destabilizing | 0.317 | N | 0.542 | neutral | N | 0.45050245 | None | None | N |
T/Q | 0.1776 | likely_benign | 0.1823 | benign | -0.797 | Destabilizing | 0.555 | D | 0.559 | neutral | None | None | None | None | N |
T/R | 0.103 | likely_benign | 0.1086 | benign | -0.436 | Destabilizing | 0.38 | N | 0.543 | neutral | None | None | None | None | N |
T/S | 0.0846 | likely_benign | 0.0855 | benign | -1.082 | Destabilizing | 0.005 | N | 0.192 | neutral | N | 0.433935487 | None | None | N |
T/V | 0.0978 | likely_benign | 0.101 | benign | -0.687 | Destabilizing | 0.035 | N | 0.473 | neutral | None | None | None | None | N |
T/W | 0.5225 | ambiguous | 0.5419 | ambiguous | -1.023 | Destabilizing | 0.935 | D | 0.603 | neutral | None | None | None | None | N |
T/Y | 0.2111 | likely_benign | 0.2235 | benign | -0.774 | Destabilizing | 0.555 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.