Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5476 | 16651;16652;16653 | chr2:178732635;178732634;178732633 | chr2:179597362;179597361;179597360 |
N2AB | 5159 | 15700;15701;15702 | chr2:178732635;178732634;178732633 | chr2:179597362;179597361;179597360 |
N2A | 4232 | 12919;12920;12921 | chr2:178732635;178732634;178732633 | chr2:179597362;179597361;179597360 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.003 | N | 0.18 | 0.157 | 0.281381271821 | gnomAD-4.0.0 | 8.40227E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18753E-06 | 0 | 0 |
S/Y | None | None | 0.473 | N | 0.626 | 0.367 | 0.647671066071 | gnomAD-4.0.0 | 1.59239E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88381E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1644 | likely_benign | 0.1597 | benign | -0.116 | Destabilizing | 0.139 | N | 0.255 | neutral | N | 0.504563434 | None | None | I |
S/C | 0.3191 | likely_benign | 0.3128 | benign | -0.272 | Destabilizing | 0.975 | D | 0.505 | neutral | D | 0.530096597 | None | None | I |
S/D | 0.6896 | likely_pathogenic | 0.7441 | pathogenic | 0.15 | Stabilizing | 0.704 | D | 0.339 | neutral | None | None | None | None | I |
S/E | 0.8317 | likely_pathogenic | 0.8556 | pathogenic | 0.052 | Stabilizing | 0.704 | D | 0.305 | neutral | None | None | None | None | I |
S/F | 0.5169 | ambiguous | 0.5416 | ambiguous | -0.785 | Destabilizing | 0.006 | N | 0.381 | neutral | N | 0.501640559 | None | None | I |
S/G | 0.1671 | likely_benign | 0.1717 | benign | -0.197 | Destabilizing | 0.495 | N | 0.337 | neutral | None | None | None | None | I |
S/H | 0.6676 | likely_pathogenic | 0.6853 | pathogenic | -0.559 | Destabilizing | 0.981 | D | 0.508 | neutral | None | None | None | None | I |
S/I | 0.5191 | ambiguous | 0.5491 | ambiguous | -0.038 | Destabilizing | 0.704 | D | 0.571 | neutral | None | None | None | None | I |
S/K | 0.8787 | likely_pathogenic | 0.8929 | pathogenic | -0.35 | Destabilizing | 0.704 | D | 0.319 | neutral | None | None | None | None | I |
S/L | 0.2531 | likely_benign | 0.2645 | benign | -0.038 | Destabilizing | 0.329 | N | 0.587 | neutral | None | None | None | None | I |
S/M | 0.4169 | ambiguous | 0.4333 | ambiguous | -0.052 | Destabilizing | 0.981 | D | 0.516 | neutral | None | None | None | None | I |
S/N | 0.3133 | likely_benign | 0.3384 | benign | -0.059 | Destabilizing | 0.704 | D | 0.355 | neutral | None | None | None | None | I |
S/P | 0.7594 | likely_pathogenic | 0.8191 | pathogenic | -0.037 | Destabilizing | 0.784 | D | 0.511 | neutral | D | 0.534675697 | None | None | I |
S/Q | 0.7756 | likely_pathogenic | 0.7901 | pathogenic | -0.275 | Destabilizing | 0.944 | D | 0.437 | neutral | None | None | None | None | I |
S/R | 0.8195 | likely_pathogenic | 0.8307 | pathogenic | -0.119 | Destabilizing | 0.704 | D | 0.519 | neutral | None | None | None | None | I |
S/T | 0.0861 | likely_benign | 0.0917 | benign | -0.158 | Destabilizing | 0.003 | N | 0.18 | neutral | N | 0.427353444 | None | None | I |
S/V | 0.4708 | ambiguous | 0.4901 | ambiguous | -0.037 | Destabilizing | 0.329 | N | 0.594 | neutral | None | None | None | None | I |
S/W | 0.6349 | likely_pathogenic | 0.673 | pathogenic | -0.87 | Destabilizing | 0.995 | D | 0.623 | neutral | None | None | None | None | I |
S/Y | 0.4482 | ambiguous | 0.4792 | ambiguous | -0.544 | Destabilizing | 0.473 | N | 0.626 | neutral | N | 0.502448636 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.