Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5482 | 16669;16670;16671 | chr2:178732617;178732616;178732615 | chr2:179597344;179597343;179597342 |
N2AB | 5165 | 15718;15719;15720 | chr2:178732617;178732616;178732615 | chr2:179597344;179597343;179597342 |
N2A | 4238 | 12937;12938;12939 | chr2:178732617;178732616;178732615 | chr2:179597344;179597343;179597342 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs1261601154 | None | 0.055 | N | 0.581 | 0.348 | 0.434606191737 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/G | rs1261601154 | None | 0.055 | N | 0.581 | 0.348 | 0.434606191737 | gnomAD-4.0.0 | 2.47918E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39065E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1868 | likely_benign | 0.2187 | benign | -0.744 | Destabilizing | 0.016 | N | 0.515 | neutral | None | None | None | None | N |
R/C | 0.1292 | likely_benign | 0.1198 | benign | -0.758 | Destabilizing | 0.864 | D | 0.584 | neutral | None | None | None | None | N |
R/D | 0.4857 | ambiguous | 0.5241 | ambiguous | -0.06 | Destabilizing | 0.038 | N | 0.593 | neutral | None | None | None | None | N |
R/E | 0.2118 | likely_benign | 0.2562 | benign | 0.101 | Stabilizing | None | N | 0.223 | neutral | None | None | None | None | N |
R/F | 0.3957 | ambiguous | 0.4236 | ambiguous | -0.436 | Destabilizing | 0.214 | N | 0.587 | neutral | None | None | None | None | N |
R/G | 0.1313 | likely_benign | 0.1468 | benign | -1.076 | Destabilizing | 0.055 | N | 0.581 | neutral | N | 0.488099093 | None | None | N |
R/H | 0.0833 | likely_benign | 0.08 | benign | -1.418 | Destabilizing | 0.356 | N | 0.605 | neutral | None | None | None | None | N |
R/I | 0.1775 | likely_benign | 0.1989 | benign | 0.156 | Stabilizing | 0.093 | N | 0.609 | neutral | N | 0.488729977 | None | None | N |
R/K | 0.0693 | likely_benign | 0.0821 | benign | -0.604 | Destabilizing | None | N | 0.239 | neutral | N | 0.428545523 | None | None | N |
R/L | 0.1516 | likely_benign | 0.1662 | benign | 0.156 | Stabilizing | 0.016 | N | 0.547 | neutral | None | None | None | None | N |
R/M | 0.1622 | likely_benign | 0.1932 | benign | -0.377 | Destabilizing | 0.007 | N | 0.361 | neutral | None | None | None | None | N |
R/N | 0.3007 | likely_benign | 0.3485 | ambiguous | -0.357 | Destabilizing | 0.072 | N | 0.571 | neutral | None | None | None | None | N |
R/P | 0.8338 | likely_pathogenic | 0.8621 | pathogenic | -0.123 | Destabilizing | 0.356 | N | 0.609 | neutral | None | None | None | None | N |
R/Q | 0.0753 | likely_benign | 0.0812 | benign | -0.377 | Destabilizing | 0.038 | N | 0.593 | neutral | None | None | None | None | N |
R/S | 0.1866 | likely_benign | 0.2168 | benign | -1.055 | Destabilizing | 0.012 | N | 0.543 | neutral | N | 0.408898182 | None | None | N |
R/T | 0.0982 | likely_benign | 0.1138 | benign | -0.693 | Destabilizing | 0.055 | N | 0.582 | neutral | N | 0.443378902 | None | None | N |
R/V | 0.2107 | likely_benign | 0.2402 | benign | -0.123 | Destabilizing | 0.038 | N | 0.595 | neutral | None | None | None | None | N |
R/W | 0.1652 | likely_benign | 0.1754 | benign | -0.141 | Destabilizing | 0.864 | D | 0.605 | neutral | None | None | None | None | N |
R/Y | 0.2793 | likely_benign | 0.2947 | benign | 0.135 | Stabilizing | 0.628 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.