Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5488 | 16687;16688;16689 | chr2:178732599;178732598;178732597 | chr2:179597326;179597325;179597324 |
N2AB | 5171 | 15736;15737;15738 | chr2:178732599;178732598;178732597 | chr2:179597326;179597325;179597324 |
N2A | 4244 | 12955;12956;12957 | chr2:178732599;178732598;178732597 | chr2:179597326;179597325;179597324 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | None | N | 0.229 | 0.209 | 0.319402600006 | gnomAD-4.0.0 | 3.18307E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71713E-06 | 0 | 0 |
K/N | rs760521859 | 0.227 | None | N | 0.253 | 0.125 | 0.1749357433 | gnomAD-2.1.1 | 5.24E-05 | None | None | None | None | N | None | 0 | 3.48331E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66223E-04 |
K/N | rs760521859 | 0.227 | None | N | 0.253 | 0.125 | 0.1749357433 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.96464E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs760521859 | 0.227 | None | N | 0.253 | 0.125 | 0.1749357433 | gnomAD-4.0.0 | 1.17751E-05 | None | None | None | None | N | None | 0 | 3.0014E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60128E-05 |
K/R | None | None | None | N | 0.225 | 0.099 | 0.308278614506 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77685E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1696 | likely_benign | 0.2204 | benign | -0.085 | Destabilizing | None | N | 0.177 | neutral | None | None | None | None | N |
K/C | 0.5694 | likely_pathogenic | 0.6597 | pathogenic | -0.352 | Destabilizing | 0.676 | D | 0.252 | neutral | None | None | None | None | N |
K/D | 0.2214 | likely_benign | 0.3061 | benign | 0.111 | Stabilizing | 0.016 | N | 0.363 | neutral | None | None | None | None | N |
K/E | 0.0692 | likely_benign | 0.0847 | benign | 0.162 | Stabilizing | None | N | 0.229 | neutral | N | 0.475203319 | None | None | N |
K/F | 0.5913 | likely_pathogenic | 0.7152 | pathogenic | -0.076 | Destabilizing | 0.356 | N | 0.275 | neutral | None | None | None | None | N |
K/G | 0.2596 | likely_benign | 0.3621 | ambiguous | -0.344 | Destabilizing | 0.016 | N | 0.365 | neutral | None | None | None | None | N |
K/H | 0.211 | likely_benign | 0.2516 | benign | -0.538 | Destabilizing | 0.214 | N | 0.308 | neutral | None | None | None | None | N |
K/I | 0.2085 | likely_benign | 0.257 | benign | 0.537 | Stabilizing | 0.171 | N | 0.322 | neutral | N | 0.481670719 | None | None | N |
K/L | 0.225 | likely_benign | 0.2991 | benign | 0.537 | Stabilizing | 0.038 | N | 0.359 | neutral | None | None | None | None | N |
K/M | 0.1466 | likely_benign | 0.1824 | benign | 0.15 | Stabilizing | 0.628 | D | 0.31 | neutral | None | None | None | None | N |
K/N | 0.188 | likely_benign | 0.2337 | benign | -0.04 | Destabilizing | None | N | 0.253 | neutral | N | 0.485729744 | None | None | N |
K/P | 0.7636 | likely_pathogenic | 0.8729 | pathogenic | 0.359 | Stabilizing | 0.136 | N | 0.368 | neutral | None | None | None | None | N |
K/Q | 0.0822 | likely_benign | 0.091 | benign | -0.116 | Destabilizing | 0.029 | N | 0.325 | neutral | N | 0.46829599 | None | None | N |
K/R | 0.075 | likely_benign | 0.0787 | benign | -0.19 | Destabilizing | None | N | 0.225 | neutral | N | 0.426662798 | None | None | N |
K/S | 0.1877 | likely_benign | 0.2529 | benign | -0.544 | Destabilizing | None | N | 0.191 | neutral | None | None | None | None | N |
K/T | 0.0904 | likely_benign | 0.1051 | benign | -0.322 | Destabilizing | 0.001 | N | 0.251 | neutral | N | 0.458889859 | None | None | N |
K/V | 0.1708 | likely_benign | 0.2133 | benign | 0.359 | Stabilizing | 0.038 | N | 0.375 | neutral | None | None | None | None | N |
K/W | 0.5954 | likely_pathogenic | 0.7065 | pathogenic | -0.084 | Destabilizing | 0.864 | D | 0.27 | neutral | None | None | None | None | N |
K/Y | 0.4389 | ambiguous | 0.5485 | ambiguous | 0.244 | Stabilizing | 0.356 | N | 0.284 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.