Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5489 | 16690;16691;16692 | chr2:178732596;178732595;178732594 | chr2:179597323;179597322;179597321 |
N2AB | 5172 | 15739;15740;15741 | chr2:178732596;178732595;178732594 | chr2:179597323;179597322;179597321 |
N2A | 4245 | 12958;12959;12960 | chr2:178732596;178732595;178732594 | chr2:179597323;179597322;179597321 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.977 | D | 0.475 | 0.269 | 0.267755039894 | gnomAD-4.0.0 | 6.84254E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99496E-07 | 0 | 0 |
E/K | rs1171851091 | 0.46 | 0.117 | N | 0.334 | 0.232 | 0.357929162469 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2321 | likely_benign | 0.2837 | benign | -0.546 | Destabilizing | 0.977 | D | 0.589 | neutral | D | 0.533790263 | None | None | N |
E/C | 0.9391 | likely_pathogenic | 0.9567 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/D | 0.3515 | ambiguous | 0.4424 | ambiguous | -0.684 | Destabilizing | 0.977 | D | 0.475 | neutral | D | 0.528883088 | None | None | N |
E/F | 0.8944 | likely_pathogenic | 0.941 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/G | 0.4448 | ambiguous | 0.5678 | pathogenic | -0.878 | Destabilizing | 0.993 | D | 0.594 | neutral | N | 0.49335624 | None | None | N |
E/H | 0.7732 | likely_pathogenic | 0.8493 | pathogenic | 0.318 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
E/I | 0.4745 | ambiguous | 0.5824 | pathogenic | 0.349 | Stabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/K | 0.3366 | likely_benign | 0.4574 | ambiguous | -0.144 | Destabilizing | 0.117 | N | 0.334 | neutral | N | 0.483971263 | None | None | N |
E/L | 0.4712 | ambiguous | 0.5712 | pathogenic | 0.349 | Stabilizing | 0.995 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/M | 0.5468 | ambiguous | 0.6357 | pathogenic | 0.42 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/N | 0.565 | likely_pathogenic | 0.6803 | pathogenic | -0.816 | Destabilizing | 0.995 | D | 0.646 | neutral | None | None | None | None | N |
E/P | 0.4644 | ambiguous | 0.5074 | ambiguous | 0.072 | Stabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/Q | 0.2428 | likely_benign | 0.291 | benign | -0.673 | Destabilizing | 0.977 | D | 0.571 | neutral | N | 0.492315829 | None | None | N |
E/R | 0.5372 | ambiguous | 0.6502 | pathogenic | 0.281 | Stabilizing | 0.99 | D | 0.629 | neutral | None | None | None | None | N |
E/S | 0.4798 | ambiguous | 0.5982 | pathogenic | -1.037 | Destabilizing | 0.983 | D | 0.596 | neutral | None | None | None | None | N |
E/T | 0.4734 | ambiguous | 0.5854 | pathogenic | -0.75 | Destabilizing | 0.995 | D | 0.651 | neutral | None | None | None | None | N |
E/V | 0.2752 | likely_benign | 0.3523 | ambiguous | 0.072 | Stabilizing | 0.997 | D | 0.689 | prob.neutral | D | 0.529096519 | None | None | N |
E/W | 0.9704 | likely_pathogenic | 0.9831 | pathogenic | 0.499 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/Y | 0.8245 | likely_pathogenic | 0.8935 | pathogenic | 0.474 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.