Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5490 | 16693;16694;16695 | chr2:178732593;178732592;178732591 | chr2:179597320;179597319;179597318 |
N2AB | 5173 | 15742;15743;15744 | chr2:178732593;178732592;178732591 | chr2:179597320;179597319;179597318 |
N2A | 4246 | 12961;12962;12963 | chr2:178732593;178732592;178732591 | chr2:179597320;179597319;179597318 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.998 | N | 0.759 | 0.71 | 0.897561542109 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
L/V | None | None | 0.835 | N | 0.431 | 0.228 | 0.520161069619 | gnomAD-4.0.0 | 6.84262E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99502E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5889 | likely_pathogenic | 0.7045 | pathogenic | -2.114 | Highly Destabilizing | 0.97 | D | 0.495 | neutral | None | None | None | None | I |
L/C | 0.8467 | likely_pathogenic | 0.9013 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
L/D | 0.9758 | likely_pathogenic | 0.9868 | pathogenic | -2.257 | Highly Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | I |
L/E | 0.8376 | likely_pathogenic | 0.8866 | pathogenic | -2.038 | Highly Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/F | 0.2847 | likely_benign | 0.4065 | ambiguous | -1.265 | Destabilizing | 0.991 | D | 0.495 | neutral | None | None | None | None | I |
L/G | 0.929 | likely_pathogenic | 0.954 | pathogenic | -2.61 | Highly Destabilizing | 0.996 | D | 0.722 | prob.delet. | None | None | None | None | I |
L/H | 0.7694 | likely_pathogenic | 0.8453 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
L/I | 0.0853 | likely_benign | 0.1096 | benign | -0.693 | Destabilizing | 0.304 | N | 0.193 | neutral | None | None | None | None | I |
L/K | 0.782 | likely_pathogenic | 0.8259 | pathogenic | -1.557 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | I |
L/M | 0.1452 | likely_benign | 0.1656 | benign | -0.555 | Destabilizing | 0.835 | D | 0.418 | neutral | D | 0.535913422 | None | None | I |
L/N | 0.9166 | likely_pathogenic | 0.945 | pathogenic | -1.919 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
L/P | 0.9258 | likely_pathogenic | 0.9567 | pathogenic | -1.147 | Destabilizing | 0.998 | D | 0.759 | deleterious | N | 0.518331165 | None | None | I |
L/Q | 0.641 | likely_pathogenic | 0.699 | pathogenic | -1.797 | Destabilizing | 0.994 | D | 0.712 | prob.delet. | D | 0.523851347 | None | None | I |
L/R | 0.6718 | likely_pathogenic | 0.7425 | pathogenic | -1.293 | Destabilizing | 0.994 | D | 0.701 | prob.neutral | D | 0.525737451 | None | None | I |
L/S | 0.8733 | likely_pathogenic | 0.9237 | pathogenic | -2.574 | Highly Destabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | I |
L/T | 0.6066 | likely_pathogenic | 0.7178 | pathogenic | -2.21 | Highly Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | I |
L/V | 0.1167 | likely_benign | 0.1472 | benign | -1.147 | Destabilizing | 0.835 | D | 0.431 | neutral | N | 0.497661678 | None | None | I |
L/W | 0.5519 | ambiguous | 0.6732 | pathogenic | -1.58 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
L/Y | 0.6673 | likely_pathogenic | 0.7728 | pathogenic | -1.241 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.