Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5501 | 16726;16727;16728 | chr2:178732560;178732559;178732558 | chr2:179597287;179597286;179597285 |
N2AB | 5184 | 15775;15776;15777 | chr2:178732560;178732559;178732558 | chr2:179597287;179597286;179597285 |
N2A | 4257 | 12994;12995;12996 | chr2:178732560;178732559;178732558 | chr2:179597287;179597286;179597285 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.013 | N | 0.162 | 0.245 | 0.32580497728 | gnomAD-4.0.0 | 6.84262E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99489E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1264 | likely_benign | 0.1534 | benign | -0.408 | Destabilizing | 0.505 | D | 0.427 | neutral | D | 0.530982031 | None | None | N |
E/C | 0.8154 | likely_pathogenic | 0.8741 | pathogenic | -0.032 | Destabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | N |
E/D | 0.0883 | likely_benign | 0.1095 | benign | -0.409 | Destabilizing | 0.001 | N | 0.126 | neutral | N | 0.45738835 | None | None | N |
E/F | 0.6502 | likely_pathogenic | 0.7542 | pathogenic | -0.286 | Destabilizing | 0.967 | D | 0.527 | neutral | None | None | None | None | N |
E/G | 0.0997 | likely_benign | 0.1247 | benign | -0.606 | Destabilizing | 0.505 | D | 0.466 | neutral | N | 0.510300115 | None | None | N |
E/H | 0.3735 | ambiguous | 0.4485 | ambiguous | -0.065 | Destabilizing | 0.906 | D | 0.362 | neutral | None | None | None | None | N |
E/I | 0.3494 | ambiguous | 0.4321 | ambiguous | 0.081 | Stabilizing | 0.906 | D | 0.532 | neutral | None | None | None | None | N |
E/K | 0.1219 | likely_benign | 0.1498 | benign | 0.367 | Stabilizing | 0.013 | N | 0.162 | neutral | N | 0.491980926 | None | None | N |
E/L | 0.3604 | ambiguous | 0.4515 | ambiguous | 0.081 | Stabilizing | 0.906 | D | 0.481 | neutral | None | None | None | None | N |
E/M | 0.4077 | ambiguous | 0.4878 | ambiguous | 0.19 | Stabilizing | 0.991 | D | 0.528 | neutral | None | None | None | None | N |
E/N | 0.1569 | likely_benign | 0.2104 | benign | -0.008 | Destabilizing | 0.404 | N | 0.387 | neutral | None | None | None | None | N |
E/P | 0.6865 | likely_pathogenic | 0.7714 | pathogenic | -0.062 | Destabilizing | 0.906 | D | 0.423 | neutral | None | None | None | None | N |
E/Q | 0.1352 | likely_benign | 0.1506 | benign | 0.024 | Stabilizing | 0.505 | D | 0.391 | neutral | N | 0.509163964 | None | None | N |
E/R | 0.2197 | likely_benign | 0.2669 | benign | 0.553 | Stabilizing | 0.404 | N | 0.374 | neutral | None | None | None | None | N |
E/S | 0.1521 | likely_benign | 0.1953 | benign | -0.149 | Destabilizing | 0.404 | N | 0.381 | neutral | None | None | None | None | N |
E/T | 0.1756 | likely_benign | 0.2116 | benign | 0.016 | Stabilizing | 0.575 | D | 0.439 | neutral | None | None | None | None | N |
E/V | 0.1833 | likely_benign | 0.2217 | benign | -0.062 | Destabilizing | 0.879 | D | 0.459 | neutral | N | 0.491203419 | None | None | N |
E/W | 0.8289 | likely_pathogenic | 0.8908 | pathogenic | -0.125 | Destabilizing | 0.991 | D | 0.631 | neutral | None | None | None | None | N |
E/Y | 0.4983 | ambiguous | 0.6123 | pathogenic | -0.036 | Destabilizing | 0.967 | D | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.