Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5505 | 16738;16739;16740 | chr2:178732548;178732547;178732546 | chr2:179597275;179597274;179597273 |
N2AB | 5188 | 15787;15788;15789 | chr2:178732548;178732547;178732546 | chr2:179597275;179597274;179597273 |
N2A | 4261 | 13006;13007;13008 | chr2:178732548;178732547;178732546 | chr2:179597275;179597274;179597273 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs2080739721 | None | 0.999 | N | 0.645 | 0.304 | 0.156986980423 | gnomAD-4.0.0 | 1.59157E-06 | None | None | None | None | N | None | 5.65355E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1071 | likely_benign | 0.1035 | benign | -0.965 | Destabilizing | 0.998 | D | 0.601 | neutral | None | None | None | None | N |
S/C | 0.1428 | likely_benign | 0.1411 | benign | -0.588 | Destabilizing | 1.0 | D | 0.828 | deleterious | N | 0.47393023 | None | None | N |
S/D | 0.902 | likely_pathogenic | 0.9294 | pathogenic | -1.562 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
S/E | 0.9515 | likely_pathogenic | 0.9649 | pathogenic | -1.334 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
S/F | 0.5756 | likely_pathogenic | 0.6227 | pathogenic | -0.684 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
S/G | 0.1572 | likely_benign | 0.1737 | benign | -1.37 | Destabilizing | 0.999 | D | 0.646 | neutral | N | 0.454189676 | None | None | N |
S/H | 0.8276 | likely_pathogenic | 0.8542 | pathogenic | -1.536 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
S/I | 0.4011 | ambiguous | 0.4481 | ambiguous | 0.084 | Stabilizing | 1.0 | D | 0.857 | deleterious | N | 0.503039629 | None | None | N |
S/K | 0.9896 | likely_pathogenic | 0.9927 | pathogenic | -0.078 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
S/L | 0.2993 | likely_benign | 0.3216 | benign | 0.084 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
S/M | 0.441 | ambiguous | 0.4652 | ambiguous | -0.08 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
S/N | 0.4716 | ambiguous | 0.5539 | ambiguous | -0.863 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.48747553 | None | None | N |
S/P | 0.8678 | likely_pathogenic | 0.8873 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
S/Q | 0.93 | likely_pathogenic | 0.9439 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
S/R | 0.9802 | likely_pathogenic | 0.9856 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.489302327 | None | None | N |
S/T | 0.1292 | likely_benign | 0.1298 | benign | -0.518 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.416247363 | None | None | N |
S/V | 0.3331 | likely_benign | 0.3498 | ambiguous | -0.234 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
S/W | 0.7669 | likely_pathogenic | 0.8063 | pathogenic | -0.958 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
S/Y | 0.5043 | ambiguous | 0.5411 | ambiguous | -0.509 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.