Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5514 | 16765;16766;16767 | chr2:178732521;178732520;178732519 | chr2:179597248;179597247;179597246 |
N2AB | 5197 | 15814;15815;15816 | chr2:178732521;178732520;178732519 | chr2:179597248;179597247;179597246 |
N2A | 4270 | 13033;13034;13035 | chr2:178732521;178732520;178732519 | chr2:179597248;179597247;179597246 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.004 | N | 0.175 | 0.088 | 0.163833314356 | gnomAD-4.0.0 | 1.59152E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85847E-06 | 0 | 0 |
T/N | rs2080735339 | None | 0.896 | N | 0.247 | 0.178 | 0.197625483188 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs2080735339 | None | 0.896 | N | 0.247 | 0.178 | 0.197625483188 | gnomAD-4.0.0 | 6.57255E-06 | None | None | None | None | I | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0672 | likely_benign | 0.0651 | benign | -0.435 | Destabilizing | 0.334 | N | 0.267 | neutral | N | 0.4424311 | None | None | I |
T/C | 0.3753 | ambiguous | 0.4088 | ambiguous | -0.264 | Destabilizing | 0.992 | D | 0.271 | neutral | None | None | None | None | I |
T/D | 0.2515 | likely_benign | 0.2802 | benign | 0.348 | Stabilizing | 0.766 | D | 0.321 | neutral | None | None | None | None | I |
T/E | 0.2029 | likely_benign | 0.2192 | benign | 0.279 | Stabilizing | 0.617 | D | 0.341 | neutral | None | None | None | None | I |
T/F | 0.2001 | likely_benign | 0.2247 | benign | -0.893 | Destabilizing | 0.85 | D | 0.323 | neutral | None | None | None | None | I |
T/G | 0.1766 | likely_benign | 0.1934 | benign | -0.576 | Destabilizing | 0.617 | D | 0.339 | neutral | None | None | None | None | I |
T/H | 0.1831 | likely_benign | 0.2033 | benign | -0.87 | Destabilizing | 0.992 | D | 0.291 | neutral | None | None | None | None | I |
T/I | 0.1097 | likely_benign | 0.1173 | benign | -0.182 | Destabilizing | 0.004 | N | 0.175 | neutral | N | 0.477063749 | None | None | I |
T/K | 0.1393 | likely_benign | 0.1425 | benign | -0.299 | Destabilizing | 0.617 | D | 0.335 | neutral | None | None | None | None | I |
T/L | 0.0796 | likely_benign | 0.0836 | benign | -0.182 | Destabilizing | 0.103 | N | 0.309 | neutral | None | None | None | None | I |
T/M | 0.081 | likely_benign | 0.0841 | benign | 0.041 | Stabilizing | 0.85 | D | 0.267 | neutral | None | None | None | None | I |
T/N | 0.0828 | likely_benign | 0.0878 | benign | -0.087 | Destabilizing | 0.896 | D | 0.247 | neutral | N | 0.497959096 | None | None | I |
T/P | 0.0575 | likely_benign | 0.0577 | benign | -0.237 | Destabilizing | 0.001 | N | 0.128 | neutral | N | 0.380131848 | None | None | I |
T/Q | 0.1592 | likely_benign | 0.1707 | benign | -0.318 | Destabilizing | 0.92 | D | 0.282 | neutral | None | None | None | None | I |
T/R | 0.1276 | likely_benign | 0.1301 | benign | -0.05 | Destabilizing | 0.92 | D | 0.295 | neutral | None | None | None | None | I |
T/S | 0.0896 | likely_benign | 0.0946 | benign | -0.36 | Destabilizing | 0.549 | D | 0.251 | neutral | N | 0.43450505 | None | None | I |
T/V | 0.103 | likely_benign | 0.1059 | benign | -0.237 | Destabilizing | 0.021 | N | 0.115 | neutral | None | None | None | None | I |
T/W | 0.511 | ambiguous | 0.5666 | pathogenic | -0.862 | Destabilizing | 0.992 | D | 0.351 | neutral | None | None | None | None | I |
T/Y | 0.1988 | likely_benign | 0.2278 | benign | -0.583 | Destabilizing | 0.92 | D | 0.303 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.