Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5524 | 16795;16796;16797 | chr2:178732491;178732490;178732489 | chr2:179597218;179597217;179597216 |
N2AB | 5207 | 15844;15845;15846 | chr2:178732491;178732490;178732489 | chr2:179597218;179597217;179597216 |
N2A | 4280 | 13063;13064;13065 | chr2:178732491;178732490;178732489 | chr2:179597218;179597217;179597216 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.004 | N | 0.272 | 0.134 | 0.41921206133 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85914E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4122 | ambiguous | 0.476 | ambiguous | -2.117 | Highly Destabilizing | 0.581 | D | 0.603 | neutral | N | 0.429057237 | None | None | N |
V/C | 0.9637 | likely_pathogenic | 0.9692 | pathogenic | -1.695 | Destabilizing | 0.993 | D | 0.866 | deleterious | None | None | None | None | N |
V/D | 0.9917 | likely_pathogenic | 0.9917 | pathogenic | -2.863 | Highly Destabilizing | 0.908 | D | 0.884 | deleterious | D | 0.547422877 | None | None | N |
V/E | 0.9795 | likely_pathogenic | 0.9796 | pathogenic | -2.574 | Highly Destabilizing | 0.929 | D | 0.873 | deleterious | None | None | None | None | N |
V/F | 0.7294 | likely_pathogenic | 0.7502 | pathogenic | -1.165 | Destabilizing | 0.83 | D | 0.871 | deleterious | D | 0.535813083 | None | None | N |
V/G | 0.7392 | likely_pathogenic | 0.7536 | pathogenic | -2.724 | Highly Destabilizing | 0.908 | D | 0.868 | deleterious | N | 0.503719176 | None | None | N |
V/H | 0.9955 | likely_pathogenic | 0.9961 | pathogenic | -2.621 | Highly Destabilizing | 0.993 | D | 0.882 | deleterious | None | None | None | None | N |
V/I | 0.1051 | likely_benign | 0.1073 | benign | -0.382 | Destabilizing | 0.004 | N | 0.272 | neutral | N | 0.511302979 | None | None | N |
V/K | 0.9915 | likely_pathogenic | 0.9915 | pathogenic | -1.659 | Destabilizing | 0.929 | D | 0.873 | deleterious | None | None | None | None | N |
V/L | 0.5059 | ambiguous | 0.5454 | ambiguous | -0.382 | Destabilizing | 0.09 | N | 0.601 | neutral | N | 0.513972618 | None | None | N |
V/M | 0.5655 | likely_pathogenic | 0.6299 | pathogenic | -0.622 | Destabilizing | 0.866 | D | 0.831 | deleterious | None | None | None | None | N |
V/N | 0.9746 | likely_pathogenic | 0.9783 | pathogenic | -2.181 | Highly Destabilizing | 0.976 | D | 0.908 | deleterious | None | None | None | None | N |
V/P | 0.9915 | likely_pathogenic | 0.9919 | pathogenic | -0.937 | Destabilizing | 0.976 | D | 0.881 | deleterious | None | None | None | None | N |
V/Q | 0.9822 | likely_pathogenic | 0.9832 | pathogenic | -1.882 | Destabilizing | 0.976 | D | 0.909 | deleterious | None | None | None | None | N |
V/R | 0.9821 | likely_pathogenic | 0.9803 | pathogenic | -1.73 | Destabilizing | 0.929 | D | 0.905 | deleterious | None | None | None | None | N |
V/S | 0.8596 | likely_pathogenic | 0.8894 | pathogenic | -2.791 | Highly Destabilizing | 0.929 | D | 0.853 | deleterious | None | None | None | None | N |
V/T | 0.782 | likely_pathogenic | 0.8287 | pathogenic | -2.34 | Highly Destabilizing | 0.648 | D | 0.696 | prob.neutral | None | None | None | None | N |
V/W | 0.9962 | likely_pathogenic | 0.9967 | pathogenic | -1.749 | Destabilizing | 0.993 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9715 | likely_pathogenic | 0.9729 | pathogenic | -1.355 | Destabilizing | 0.929 | D | 0.87 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.