Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5533 | 16822;16823;16824 | chr2:178732464;178732463;178732462 | chr2:179597191;179597190;179597189 |
N2AB | 5216 | 15871;15872;15873 | chr2:178732464;178732463;178732462 | chr2:179597191;179597190;179597189 |
N2A | 4289 | 13090;13091;13092 | chr2:178732464;178732463;178732462 | chr2:179597191;179597190;179597189 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | None | None | 0.484 | D | 0.773 | 0.353 | 0.683392867763 | gnomAD-4.0.0 | 1.59869E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87305E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.428 | ambiguous | 0.4248 | ambiguous | -1.836 | Destabilizing | 0.035 | N | 0.518 | neutral | None | None | None | None | N |
C/D | 0.6836 | likely_pathogenic | 0.7114 | pathogenic | -0.506 | Destabilizing | 0.081 | N | 0.796 | deleterious | None | None | None | None | N |
C/E | 0.8749 | likely_pathogenic | 0.8772 | pathogenic | -0.386 | Destabilizing | 0.235 | N | 0.799 | deleterious | None | None | None | None | N |
C/F | 0.3754 | ambiguous | 0.3866 | ambiguous | -1.132 | Destabilizing | 0.484 | N | 0.773 | deleterious | D | 0.533635547 | None | None | N |
C/G | 0.2557 | likely_benign | 0.2612 | benign | -2.159 | Highly Destabilizing | None | N | 0.54 | neutral | N | 0.485630331 | None | None | N |
C/H | 0.7429 | likely_pathogenic | 0.7488 | pathogenic | -2.124 | Highly Destabilizing | 0.824 | D | 0.76 | deleterious | None | None | None | None | N |
C/I | 0.6189 | likely_pathogenic | 0.6135 | pathogenic | -0.995 | Destabilizing | 0.38 | N | 0.784 | deleterious | None | None | None | None | N |
C/K | 0.9327 | likely_pathogenic | 0.932 | pathogenic | -1.084 | Destabilizing | 0.235 | N | 0.796 | deleterious | None | None | None | None | N |
C/L | 0.661 | likely_pathogenic | 0.6472 | pathogenic | -0.995 | Destabilizing | 0.149 | N | 0.718 | prob.delet. | None | None | None | None | N |
C/M | 0.7211 | likely_pathogenic | 0.7033 | pathogenic | -0.025 | Destabilizing | 0.935 | D | 0.729 | prob.delet. | None | None | None | None | N |
C/N | 0.6178 | likely_pathogenic | 0.6386 | pathogenic | -1.115 | Destabilizing | 0.235 | N | 0.801 | deleterious | None | None | None | None | N |
C/P | 0.9941 | likely_pathogenic | 0.9937 | pathogenic | -1.25 | Destabilizing | 0.38 | N | 0.797 | deleterious | None | None | None | None | N |
C/Q | 0.8141 | likely_pathogenic | 0.8059 | pathogenic | -0.987 | Destabilizing | 0.38 | N | 0.806 | deleterious | None | None | None | None | N |
C/R | 0.7459 | likely_pathogenic | 0.7439 | pathogenic | -0.975 | Destabilizing | 0.317 | N | 0.807 | deleterious | N | 0.509411893 | None | None | N |
C/S | 0.2906 | likely_benign | 0.2959 | benign | -1.668 | Destabilizing | None | N | 0.405 | neutral | N | 0.441320032 | None | None | N |
C/T | 0.4218 | ambiguous | 0.3942 | ambiguous | -1.362 | Destabilizing | 0.081 | N | 0.715 | prob.delet. | None | None | None | None | N |
C/V | 0.5082 | ambiguous | 0.4879 | ambiguous | -1.25 | Destabilizing | 0.149 | N | 0.736 | prob.delet. | None | None | None | None | N |
C/W | 0.7414 | likely_pathogenic | 0.7501 | pathogenic | -1.138 | Destabilizing | 0.915 | D | 0.721 | prob.delet. | N | 0.490505403 | None | None | N |
C/Y | 0.5052 | ambiguous | 0.531 | ambiguous | -1.131 | Destabilizing | 0.484 | N | 0.744 | deleterious | N | 0.51872481 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.