Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5534 | 16825;16826;16827 | chr2:178732461;178732460;178732459 | chr2:179597188;179597187;179597186 |
N2AB | 5217 | 15874;15875;15876 | chr2:178732461;178732460;178732459 | chr2:179597188;179597187;179597186 |
N2A | 4290 | 13093;13094;13095 | chr2:178732461;178732460;178732459 | chr2:179597188;179597187;179597186 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.549 | N | 0.473 | 0.277 | 0.426551566703 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0826 | likely_benign | 0.0861 | benign | -0.474 | Destabilizing | 0.127 | N | 0.361 | neutral | None | None | None | None | N |
S/C | 0.15 | likely_benign | 0.1588 | benign | -0.306 | Destabilizing | 0.99 | D | 0.551 | neutral | D | 0.528185625 | None | None | N |
S/D | 0.3299 | likely_benign | 0.3618 | ambiguous | -0.639 | Destabilizing | 0.617 | D | 0.491 | neutral | None | None | None | None | N |
S/E | 0.385 | ambiguous | 0.4212 | ambiguous | -0.694 | Destabilizing | 0.617 | D | 0.484 | neutral | None | None | None | None | N |
S/F | 0.1513 | likely_benign | 0.1622 | benign | -0.875 | Destabilizing | 0.92 | D | 0.641 | neutral | None | None | None | None | N |
S/G | 0.1144 | likely_benign | 0.1206 | benign | -0.663 | Destabilizing | 0.549 | D | 0.473 | neutral | N | 0.490709667 | None | None | N |
S/H | 0.2969 | likely_benign | 0.312 | benign | -1.305 | Destabilizing | 0.992 | D | 0.553 | neutral | None | None | None | None | N |
S/I | 0.1508 | likely_benign | 0.1619 | benign | -0.093 | Destabilizing | 0.379 | N | 0.596 | neutral | D | 0.526384288 | None | None | N |
S/K | 0.4972 | ambiguous | 0.5235 | ambiguous | -0.822 | Destabilizing | 0.617 | D | 0.481 | neutral | None | None | None | None | N |
S/L | 0.0965 | likely_benign | 0.1028 | benign | -0.093 | Destabilizing | 0.25 | N | 0.556 | neutral | None | None | None | None | N |
S/M | 0.1917 | likely_benign | 0.2022 | benign | 0.341 | Stabilizing | 0.92 | D | 0.566 | neutral | None | None | None | None | N |
S/N | 0.1424 | likely_benign | 0.1455 | benign | -0.654 | Destabilizing | 0.549 | D | 0.526 | neutral | D | 0.525690855 | None | None | N |
S/P | 0.2851 | likely_benign | 0.2897 | benign | -0.188 | Destabilizing | 0.92 | D | 0.573 | neutral | None | None | None | None | N |
S/Q | 0.3957 | ambiguous | 0.4207 | ambiguous | -0.919 | Destabilizing | 0.92 | D | 0.515 | neutral | None | None | None | None | N |
S/R | 0.4001 | ambiguous | 0.4173 | ambiguous | -0.597 | Destabilizing | 0.81 | D | 0.578 | neutral | D | 0.526690932 | None | None | N |
S/T | 0.0684 | likely_benign | 0.068 | benign | -0.625 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.426796084 | None | None | N |
S/V | 0.1498 | likely_benign | 0.1611 | benign | -0.188 | Destabilizing | 0.005 | N | 0.463 | neutral | None | None | None | None | N |
S/W | 0.317 | likely_benign | 0.3382 | benign | -0.894 | Destabilizing | 0.992 | D | 0.681 | prob.neutral | None | None | None | None | N |
S/Y | 0.1799 | likely_benign | 0.191 | benign | -0.628 | Destabilizing | 0.92 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.