Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5535 | 16828;16829;16830 | chr2:178732458;178732457;178732456 | chr2:179597185;179597184;179597183 |
N2AB | 5218 | 15877;15878;15879 | chr2:178732458;178732457;178732456 | chr2:179597185;179597184;179597183 |
N2A | 4291 | 13096;13097;13098 | chr2:178732458;178732457;178732456 | chr2:179597185;179597184;179597183 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1442669083 | -0.992 | 0.645 | N | 0.592 | 0.482 | 0.266385636622 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
A/T | rs1442669083 | -0.992 | 0.645 | N | 0.592 | 0.482 | 0.266385636622 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs1442669083 | -0.992 | 0.645 | N | 0.592 | 0.482 | 0.266385636622 | gnomAD-4.0.0 | 3.10908E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.93535E-05 | None | 0 | 0 | 8.49946E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6076 | likely_pathogenic | 0.6252 | pathogenic | -1.428 | Destabilizing | 0.995 | D | 0.66 | neutral | None | None | None | None | N |
A/D | 0.7407 | likely_pathogenic | 0.7359 | pathogenic | -1.508 | Destabilizing | 0.981 | D | 0.742 | deleterious | None | None | None | None | N |
A/E | 0.7127 | likely_pathogenic | 0.6878 | pathogenic | -1.545 | Destabilizing | 0.928 | D | 0.709 | prob.delet. | D | 0.529265716 | None | None | N |
A/F | 0.755 | likely_pathogenic | 0.7125 | pathogenic | -1.359 | Destabilizing | 0.809 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/G | 0.2154 | likely_benign | 0.226 | benign | -1.274 | Destabilizing | 0.787 | D | 0.576 | neutral | N | 0.521250614 | None | None | N |
A/H | 0.892 | likely_pathogenic | 0.8781 | pathogenic | -1.356 | Destabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/I | 0.5716 | likely_pathogenic | 0.5537 | ambiguous | -0.553 | Destabilizing | 0.547 | D | 0.633 | neutral | None | None | None | None | N |
A/K | 0.9184 | likely_pathogenic | 0.9108 | pathogenic | -1.217 | Destabilizing | 0.945 | D | 0.708 | prob.delet. | None | None | None | None | N |
A/L | 0.532 | ambiguous | 0.4933 | ambiguous | -0.553 | Destabilizing | 0.007 | N | 0.455 | neutral | None | None | None | None | N |
A/M | 0.5017 | ambiguous | 0.4809 | ambiguous | -0.521 | Destabilizing | 0.894 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/N | 0.7116 | likely_pathogenic | 0.7057 | pathogenic | -1.064 | Destabilizing | 0.981 | D | 0.736 | prob.delet. | None | None | None | None | N |
A/P | 0.9673 | likely_pathogenic | 0.9669 | pathogenic | -0.677 | Destabilizing | 0.975 | D | 0.723 | prob.delet. | D | 0.529519205 | None | None | N |
A/Q | 0.7624 | likely_pathogenic | 0.7379 | pathogenic | -1.276 | Destabilizing | 0.981 | D | 0.716 | prob.delet. | None | None | None | None | N |
A/R | 0.8497 | likely_pathogenic | 0.832 | pathogenic | -0.848 | Destabilizing | 0.945 | D | 0.716 | prob.delet. | None | None | None | None | N |
A/S | 0.1254 | likely_benign | 0.132 | benign | -1.441 | Destabilizing | 0.787 | D | 0.572 | neutral | N | 0.488498076 | None | None | N |
A/T | 0.1142 | likely_benign | 0.1184 | benign | -1.38 | Destabilizing | 0.645 | D | 0.592 | neutral | N | 0.478729201 | None | None | N |
A/V | 0.253 | likely_benign | 0.2471 | benign | -0.677 | Destabilizing | 0.024 | N | 0.405 | neutral | N | 0.5057583 | None | None | N |
A/W | 0.9509 | likely_pathogenic | 0.9418 | pathogenic | -1.615 | Destabilizing | 0.995 | D | 0.75 | deleterious | None | None | None | None | N |
A/Y | 0.8823 | likely_pathogenic | 0.8583 | pathogenic | -1.218 | Destabilizing | 0.945 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.