Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5537 | 16834;16835;16836 | chr2:178732452;178732451;178732450 | chr2:179597179;179597178;179597177 |
N2AB | 5220 | 15883;15884;15885 | chr2:178732452;178732451;178732450 | chr2:179597179;179597178;179597177 |
N2A | 4293 | 13102;13103;13104 | chr2:178732452;178732451;178732450 | chr2:179597179;179597178;179597177 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs763076529 | -1.727 | 0.997 | N | 0.831 | 0.449 | 0.494838880905 | gnomAD-4.0.0 | 1.62702E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.92502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8493 | likely_pathogenic | 0.8723 | pathogenic | -2.885 | Highly Destabilizing | 0.966 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/C | 0.8138 | likely_pathogenic | 0.8309 | pathogenic | -2.549 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9972 | likely_pathogenic | 0.9978 | pathogenic | -3.114 | Highly Destabilizing | 0.999 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.9881 | likely_pathogenic | 0.9908 | pathogenic | -2.842 | Highly Destabilizing | 0.998 | D | 0.893 | deleterious | None | None | None | None | N |
L/F | 0.4615 | ambiguous | 0.5667 | pathogenic | -1.834 | Destabilizing | 0.997 | D | 0.831 | deleterious | N | 0.513882215 | None | None | N |
L/G | 0.9739 | likely_pathogenic | 0.9789 | pathogenic | -3.485 | Highly Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
L/H | 0.9568 | likely_pathogenic | 0.9658 | pathogenic | -2.959 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/I | 0.0842 | likely_benign | 0.0936 | benign | -1.123 | Destabilizing | 0.966 | D | 0.627 | neutral | None | None | None | None | N |
L/K | 0.9865 | likely_pathogenic | 0.9888 | pathogenic | -2.261 | Highly Destabilizing | 0.998 | D | 0.892 | deleterious | None | None | None | None | N |
L/M | 0.2979 | likely_benign | 0.344 | ambiguous | -1.298 | Destabilizing | 0.997 | D | 0.803 | deleterious | D | 0.532493449 | None | None | N |
L/N | 0.9812 | likely_pathogenic | 0.9833 | pathogenic | -2.751 | Highly Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
L/P | 0.9877 | likely_pathogenic | 0.9895 | pathogenic | -1.695 | Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
L/Q | 0.9593 | likely_pathogenic | 0.9664 | pathogenic | -2.524 | Highly Destabilizing | 0.999 | D | 0.897 | deleterious | None | None | None | None | N |
L/R | 0.9581 | likely_pathogenic | 0.9651 | pathogenic | -2.067 | Highly Destabilizing | 0.999 | D | 0.904 | deleterious | None | None | None | None | N |
L/S | 0.965 | likely_pathogenic | 0.9714 | pathogenic | -3.526 | Highly Destabilizing | 0.997 | D | 0.887 | deleterious | D | 0.551358172 | None | None | N |
L/T | 0.8454 | likely_pathogenic | 0.8709 | pathogenic | -3.084 | Highly Destabilizing | 0.995 | D | 0.823 | deleterious | None | None | None | None | N |
L/V | 0.0878 | likely_benign | 0.0963 | benign | -1.695 | Destabilizing | 0.117 | N | 0.372 | neutral | N | 0.471612729 | None | None | N |
L/W | 0.9106 | likely_pathogenic | 0.934 | pathogenic | -2.17 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.551358172 | None | None | N |
L/Y | 0.8912 | likely_pathogenic | 0.9178 | pathogenic | -1.935 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.