Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5539 | 16840;16841;16842 | chr2:178732446;178732445;178732444 | chr2:179597173;179597172;179597171 |
N2AB | 5222 | 15889;15890;15891 | chr2:178732446;178732445;178732444 | chr2:179597173;179597172;179597171 |
N2A | 4295 | 13108;13109;13110 | chr2:178732446;178732445;178732444 | chr2:179597173;179597172;179597171 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs773371925 | -1.545 | 0.999 | D | 0.753 | 0.754 | 0.835049036447 | gnomAD-2.1.1 | 4.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.07E-06 | 0 |
V/A | rs773371925 | -1.545 | 0.999 | D | 0.753 | 0.754 | 0.835049036447 | gnomAD-4.0.0 | 3.25629E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.92613E-06 | 0 | 3.08985E-05 |
V/I | rs2154310288 | None | 0.997 | N | 0.722 | 0.427 | 0.721577736743 | gnomAD-4.0.0 | 1.6287E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.47584E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.768 | likely_pathogenic | 0.8336 | pathogenic | -2.119 | Highly Destabilizing | 0.999 | D | 0.753 | deleterious | D | 0.638020166 | None | None | N |
V/C | 0.9488 | likely_pathogenic | 0.9648 | pathogenic | -1.911 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/D | 0.9935 | likely_pathogenic | 0.996 | pathogenic | -2.771 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/E | 0.9751 | likely_pathogenic | 0.9824 | pathogenic | -2.611 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.622374053 | None | None | N |
V/F | 0.8323 | likely_pathogenic | 0.8931 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/G | 0.8856 | likely_pathogenic | 0.9245 | pathogenic | -2.583 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.638625579 | None | None | N |
V/H | 0.9927 | likely_pathogenic | 0.9956 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/I | 0.102 | likely_benign | 0.1057 | benign | -0.848 | Destabilizing | 0.997 | D | 0.722 | prob.delet. | N | 0.498838239 | None | None | N |
V/K | 0.9856 | likely_pathogenic | 0.9903 | pathogenic | -1.684 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/L | 0.6488 | likely_pathogenic | 0.7025 | pathogenic | -0.848 | Destabilizing | 0.997 | D | 0.758 | deleterious | D | 0.57796096 | None | None | N |
V/M | 0.6983 | likely_pathogenic | 0.7836 | pathogenic | -1.031 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/N | 0.976 | likely_pathogenic | 0.9861 | pathogenic | -1.924 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/P | 0.9521 | likely_pathogenic | 0.9618 | pathogenic | -1.245 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/Q | 0.9683 | likely_pathogenic | 0.9786 | pathogenic | -1.885 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/R | 0.9704 | likely_pathogenic | 0.9771 | pathogenic | -1.392 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.8834 | likely_pathogenic | 0.921 | pathogenic | -2.518 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/T | 0.8053 | likely_pathogenic | 0.8642 | pathogenic | -2.231 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/W | 0.9952 | likely_pathogenic | 0.9974 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
V/Y | 0.986 | likely_pathogenic | 0.9913 | pathogenic | -1.405 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.