Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5543 | 16852;16853;16854 | chr2:178732342;178732341;178732340 | chr2:179597069;179597068;179597067 |
N2AB | 5226 | 15901;15902;15903 | chr2:178732342;178732341;178732340 | chr2:179597069;179597068;179597067 |
N2A | 4299 | 13120;13121;13122 | chr2:178732342;178732341;178732340 | chr2:179597069;179597068;179597067 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1460498518 | -1.394 | 0.98 | N | 0.507 | 0.266 | 0.173771789658 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14863E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/T | rs1460498518 | -1.394 | 0.98 | N | 0.507 | 0.266 | 0.173771789658 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs1460498518 | -1.394 | 0.98 | N | 0.507 | 0.266 | 0.173771789658 | gnomAD-4.0.0 | 6.57445E-06 | None | None | None | None | N | None | 2.41429E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8015 | likely_pathogenic | 0.8006 | pathogenic | -1.528 | Destabilizing | 1.0 | D | 0.558 | neutral | None | None | None | None | N |
A/D | 0.9666 | likely_pathogenic | 0.9712 | pathogenic | -1.946 | Destabilizing | 0.994 | D | 0.557 | neutral | N | 0.480949416 | None | None | N |
A/E | 0.949 | likely_pathogenic | 0.9523 | pathogenic | -1.974 | Destabilizing | 0.985 | D | 0.518 | neutral | None | None | None | None | N |
A/F | 0.9451 | likely_pathogenic | 0.944 | pathogenic | -1.333 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
A/G | 0.4414 | ambiguous | 0.4732 | ambiguous | -1.214 | Destabilizing | 0.98 | D | 0.473 | neutral | N | 0.480949416 | None | None | N |
A/H | 0.9826 | likely_pathogenic | 0.9841 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
A/I | 0.6657 | likely_pathogenic | 0.6598 | pathogenic | -0.558 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
A/K | 0.9843 | likely_pathogenic | 0.9853 | pathogenic | -1.141 | Destabilizing | 0.985 | D | 0.52 | neutral | None | None | None | None | N |
A/L | 0.6324 | likely_pathogenic | 0.6138 | pathogenic | -0.558 | Destabilizing | 0.985 | D | 0.508 | neutral | None | None | None | None | N |
A/M | 0.7843 | likely_pathogenic | 0.7848 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.573 | neutral | None | None | None | None | N |
A/N | 0.939 | likely_pathogenic | 0.9455 | pathogenic | -1.113 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
A/P | 0.1987 | likely_benign | 0.1983 | benign | -0.669 | Destabilizing | 0.011 | N | 0.342 | neutral | N | 0.261064087 | None | None | N |
A/Q | 0.9511 | likely_pathogenic | 0.9532 | pathogenic | -1.362 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
A/R | 0.9644 | likely_pathogenic | 0.9658 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.576 | neutral | None | None | None | None | N |
A/S | 0.2742 | likely_benign | 0.3007 | benign | -1.419 | Destabilizing | 0.98 | D | 0.486 | neutral | N | 0.481296132 | None | None | N |
A/T | 0.3578 | ambiguous | 0.3878 | ambiguous | -1.363 | Destabilizing | 0.98 | D | 0.507 | neutral | N | 0.481989566 | None | None | N |
A/V | 0.3001 | likely_benign | 0.3047 | benign | -0.669 | Destabilizing | 0.98 | D | 0.503 | neutral | N | 0.46392388 | None | None | N |
A/W | 0.9936 | likely_pathogenic | 0.9939 | pathogenic | -1.592 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
A/Y | 0.9781 | likely_pathogenic | 0.9789 | pathogenic | -1.172 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.