Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5546 | 16861;16862;16863 | chr2:178732333;178732332;178732331 | chr2:179597060;179597059;179597058 |
N2AB | 5229 | 15910;15911;15912 | chr2:178732333;178732332;178732331 | chr2:179597060;179597059;179597058 |
N2A | 4302 | 13129;13130;13131 | chr2:178732333;178732332;178732331 | chr2:179597060;179597059;179597058 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs903298127 | None | 0.117 | N | 0.285 | 0.215 | 0.654939258183 | gnomAD-4.0.0 | 1.62235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.91455E-06 | 0 | 0 |
V/I | rs2154310117 | None | None | N | 0.135 | 0.06 | 0.110078149338 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0877 | likely_benign | 0.0955 | benign | -1.003 | Destabilizing | 0.027 | N | 0.217 | neutral | N | 0.451324021 | None | None | N |
V/C | 0.5381 | ambiguous | 0.6288 | pathogenic | -0.747 | Destabilizing | 0.935 | D | 0.295 | neutral | None | None | None | None | N |
V/D | 0.2114 | likely_benign | 0.2267 | benign | -0.665 | Destabilizing | 0.317 | N | 0.322 | neutral | N | 0.452844958 | None | None | N |
V/E | 0.1545 | likely_benign | 0.1606 | benign | -0.738 | Destabilizing | 0.081 | N | 0.3 | neutral | None | None | None | None | N |
V/F | 0.1176 | likely_benign | 0.1394 | benign | -0.928 | Destabilizing | 0.317 | N | 0.335 | neutral | N | 0.492305471 | None | None | N |
V/G | 0.1525 | likely_benign | 0.1645 | benign | -1.219 | Destabilizing | 0.117 | N | 0.285 | neutral | N | 0.482052029 | None | None | N |
V/H | 0.2796 | likely_benign | 0.3274 | benign | -0.67 | Destabilizing | 0.935 | D | 0.309 | neutral | None | None | None | None | N |
V/I | 0.0624 | likely_benign | 0.0696 | benign | -0.552 | Destabilizing | None | N | 0.135 | neutral | N | 0.421479825 | None | None | N |
V/K | 0.1554 | likely_benign | 0.1672 | benign | -0.863 | Destabilizing | 0.001 | N | 0.243 | neutral | None | None | None | None | N |
V/L | 0.0963 | likely_benign | 0.1131 | benign | -0.552 | Destabilizing | 0.004 | N | 0.142 | neutral | N | 0.489627614 | None | None | N |
V/M | 0.0906 | likely_benign | 0.1057 | benign | -0.45 | Destabilizing | 0.016 | N | 0.147 | neutral | None | None | None | None | N |
V/N | 0.1588 | likely_benign | 0.1906 | benign | -0.59 | Destabilizing | 0.38 | N | 0.319 | neutral | None | None | None | None | N |
V/P | 0.3957 | ambiguous | 0.4743 | ambiguous | -0.666 | Destabilizing | 0.555 | D | 0.315 | neutral | None | None | None | None | N |
V/Q | 0.1545 | likely_benign | 0.1624 | benign | -0.829 | Destabilizing | 0.38 | N | 0.33 | neutral | None | None | None | None | N |
V/R | 0.1183 | likely_benign | 0.1311 | benign | -0.268 | Destabilizing | 0.235 | N | 0.329 | neutral | None | None | None | None | N |
V/S | 0.1063 | likely_benign | 0.1173 | benign | -1.036 | Destabilizing | 0.081 | N | 0.273 | neutral | None | None | None | None | N |
V/T | 0.0772 | likely_benign | 0.0865 | benign | -1.006 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | N |
V/W | 0.5132 | ambiguous | 0.6006 | pathogenic | -1.018 | Destabilizing | 0.935 | D | 0.345 | neutral | None | None | None | None | N |
V/Y | 0.3331 | likely_benign | 0.4091 | ambiguous | -0.749 | Destabilizing | 0.555 | D | 0.317 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.