Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5549 | 16870;16871;16872 | chr2:178732324;178732323;178732322 | chr2:179597051;179597050;179597049 |
N2AB | 5232 | 15919;15920;15921 | chr2:178732324;178732323;178732322 | chr2:179597051;179597050;179597049 |
N2A | 4305 | 13138;13139;13140 | chr2:178732324;178732323;178732322 | chr2:179597051;179597050;179597049 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.64 | N | 0.353 | 0.244 | 0.270447802918 | gnomAD-4.0.0 | 1.61318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4788 | ambiguous | 0.4206 | ambiguous | -2.265 | Highly Destabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
L/C | 0.7868 | likely_pathogenic | 0.7808 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/D | 0.9679 | likely_pathogenic | 0.9609 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
L/E | 0.8591 | likely_pathogenic | 0.8377 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
L/F | 0.4635 | ambiguous | 0.4354 | ambiguous | -1.523 | Destabilizing | 0.64 | D | 0.353 | neutral | N | 0.487918287 | None | None | N |
L/G | 0.8239 | likely_pathogenic | 0.7968 | pathogenic | -2.706 | Highly Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
L/H | 0.8232 | likely_pathogenic | 0.7982 | pathogenic | -1.97 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/I | 0.1714 | likely_benign | 0.161 | benign | -1.056 | Destabilizing | 0.996 | D | 0.539 | neutral | N | 0.469622995 | None | None | N |
L/K | 0.8513 | likely_pathogenic | 0.8232 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/M | 0.1844 | likely_benign | 0.1738 | benign | -0.883 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
L/N | 0.8624 | likely_pathogenic | 0.8478 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/P | 0.2626 | likely_benign | 0.1785 | benign | -1.433 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/Q | 0.6603 | likely_pathogenic | 0.6126 | pathogenic | -1.583 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/R | 0.7581 | likely_pathogenic | 0.7128 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
L/S | 0.7741 | likely_pathogenic | 0.7434 | pathogenic | -2.266 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.490805123 | None | None | N |
L/T | 0.4975 | ambiguous | 0.4483 | ambiguous | -2.032 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/V | 0.1837 | likely_benign | 0.1751 | benign | -1.433 | Destabilizing | 0.996 | D | 0.551 | neutral | N | 0.463546608 | None | None | N |
L/W | 0.745 | likely_pathogenic | 0.6823 | pathogenic | -1.697 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/Y | 0.864 | likely_pathogenic | 0.8385 | pathogenic | -1.459 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.