Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5551 | 16876;16877;16878 | chr2:178732318;178732317;178732316 | chr2:179597045;179597044;179597043 |
N2AB | 5234 | 15925;15926;15927 | chr2:178732318;178732317;178732316 | chr2:179597045;179597044;179597043 |
N2A | 4307 | 13144;13145;13146 | chr2:178732318;178732317;178732316 | chr2:179597045;179597044;179597043 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs762729065 | 0.097 | None | N | 0.204 | 0.135 | 0.269111216191 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | I | None | 0 | 0 | None | 1.04188E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs762729065 | 0.097 | None | N | 0.204 | 0.135 | 0.269111216191 | gnomAD-4.0.0 | 1.61106E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.85767E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs1578181149 | None | 0.062 | N | 0.289 | 0.061 | 0.177238962908 | gnomAD-4.0.0 | 1.08029E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0708 | likely_benign | 0.0639 | benign | -0.302 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.460422215 | None | None | I |
P/C | 0.3906 | ambiguous | 0.3226 | benign | -0.628 | Destabilizing | 0.935 | D | 0.387 | neutral | None | None | None | None | I |
P/D | 0.2882 | likely_benign | 0.2239 | benign | 0.048 | Stabilizing | 0.149 | N | 0.335 | neutral | None | None | None | None | I |
P/E | 0.2195 | likely_benign | 0.1752 | benign | -0.069 | Destabilizing | 0.149 | N | 0.333 | neutral | None | None | None | None | I |
P/F | 0.3156 | likely_benign | 0.2454 | benign | -0.579 | Destabilizing | 0.235 | N | 0.419 | neutral | None | None | None | None | I |
P/G | 0.2109 | likely_benign | 0.1765 | benign | -0.406 | Destabilizing | 0.081 | N | 0.328 | neutral | None | None | None | None | I |
P/H | 0.1427 | likely_benign | 0.1122 | benign | -0.037 | Destabilizing | 0.824 | D | 0.38 | neutral | None | None | None | None | I |
P/I | 0.2083 | likely_benign | 0.1674 | benign | -0.187 | Destabilizing | 0.081 | N | 0.411 | neutral | None | None | None | None | I |
P/K | 0.2198 | likely_benign | 0.1657 | benign | -0.23 | Destabilizing | 0.081 | N | 0.305 | neutral | None | None | None | None | I |
P/L | 0.0952 | likely_benign | 0.0803 | benign | -0.187 | Destabilizing | None | N | 0.204 | neutral | N | 0.500999401 | None | None | I |
P/M | 0.2289 | likely_benign | 0.19 | benign | -0.303 | Destabilizing | 0.235 | N | 0.387 | neutral | None | None | None | None | I |
P/N | 0.1954 | likely_benign | 0.1567 | benign | -0.004 | Destabilizing | 0.235 | N | 0.381 | neutral | None | None | None | None | I |
P/Q | 0.1258 | likely_benign | 0.1023 | benign | -0.223 | Destabilizing | 0.317 | N | 0.333 | neutral | N | 0.508984166 | None | None | I |
P/R | 0.1538 | likely_benign | 0.1167 | benign | 0.205 | Stabilizing | 0.317 | N | 0.381 | neutral | N | 0.495073506 | None | None | I |
P/S | 0.0958 | likely_benign | 0.0789 | benign | -0.384 | Destabilizing | 0.002 | N | 0.164 | neutral | N | 0.450261149 | None | None | I |
P/T | 0.0867 | likely_benign | 0.0743 | benign | -0.4 | Destabilizing | 0.062 | N | 0.289 | neutral | N | 0.466462753 | None | None | I |
P/V | 0.152 | likely_benign | 0.1312 | benign | -0.191 | Destabilizing | 0.035 | N | 0.325 | neutral | None | None | None | None | I |
P/W | 0.4576 | ambiguous | 0.3662 | ambiguous | -0.654 | Destabilizing | 0.935 | D | 0.455 | neutral | None | None | None | None | I |
P/Y | 0.2795 | likely_benign | 0.2144 | benign | -0.344 | Destabilizing | 0.555 | D | 0.411 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.