Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5552 | 16879;16880;16881 | chr2:178732315;178732314;178732313 | chr2:179597042;179597041;179597040 |
N2AB | 5235 | 15928;15929;15930 | chr2:178732315;178732314;178732313 | chr2:179597042;179597041;179597040 |
N2A | 4308 | 13147;13148;13149 | chr2:178732315;178732314;178732313 | chr2:179597042;179597041;179597040 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.669 | N | 0.339 | 0.272 | 0.641217788028 | gnomAD-4.0.0 | 1.59916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87325E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0851 | likely_benign | 0.0898 | benign | -0.404 | Destabilizing | 0.454 | N | 0.315 | neutral | N | 0.484402563 | None | None | N |
S/C | 0.1395 | likely_benign | 0.1361 | benign | -0.319 | Destabilizing | 0.998 | D | 0.333 | neutral | None | None | None | None | N |
S/D | 0.4637 | ambiguous | 0.4022 | ambiguous | 0.192 | Stabilizing | 0.842 | D | 0.257 | neutral | None | None | None | None | N |
S/E | 0.4919 | ambiguous | 0.4338 | ambiguous | 0.128 | Stabilizing | 0.842 | D | 0.235 | neutral | None | None | None | None | N |
S/F | 0.1689 | likely_benign | 0.1531 | benign | -0.791 | Destabilizing | 0.904 | D | 0.437 | neutral | None | None | None | None | N |
S/G | 0.1201 | likely_benign | 0.118 | benign | -0.575 | Destabilizing | 0.842 | D | 0.232 | neutral | None | None | None | None | N |
S/H | 0.358 | ambiguous | 0.3145 | benign | -1.098 | Destabilizing | 0.949 | D | 0.342 | neutral | None | None | None | None | N |
S/I | 0.1726 | likely_benign | 0.1548 | benign | -0.079 | Destabilizing | 0.949 | D | 0.441 | neutral | None | None | None | None | N |
S/K | 0.6338 | likely_pathogenic | 0.5473 | ambiguous | -0.538 | Destabilizing | 0.842 | D | 0.23 | neutral | None | None | None | None | N |
S/L | 0.092 | likely_benign | 0.0905 | benign | -0.079 | Destabilizing | 0.669 | D | 0.339 | neutral | N | 0.489708936 | None | None | N |
S/M | 0.202 | likely_benign | 0.2065 | benign | 0.123 | Stabilizing | 0.991 | D | 0.339 | neutral | None | None | None | None | N |
S/N | 0.183 | likely_benign | 0.1629 | benign | -0.3 | Destabilizing | 0.842 | D | 0.293 | neutral | None | None | None | None | N |
S/P | 0.3239 | likely_benign | 0.2823 | benign | -0.155 | Destabilizing | 0.966 | D | 0.356 | neutral | N | 0.497315805 | None | None | N |
S/Q | 0.46 | ambiguous | 0.416 | ambiguous | -0.516 | Destabilizing | 0.974 | D | 0.329 | neutral | None | None | None | None | N |
S/R | 0.5389 | ambiguous | 0.4412 | ambiguous | -0.389 | Destabilizing | 0.974 | D | 0.359 | neutral | None | None | None | None | N |
S/T | 0.0731 | likely_benign | 0.0759 | benign | -0.391 | Destabilizing | 0.007 | N | 0.092 | neutral | N | 0.476512828 | None | None | N |
S/V | 0.1589 | likely_benign | 0.1555 | benign | -0.155 | Destabilizing | 0.728 | D | 0.341 | neutral | None | None | None | None | N |
S/W | 0.3195 | likely_benign | 0.2805 | benign | -0.776 | Destabilizing | 0.993 | D | 0.437 | neutral | None | None | None | None | N |
S/Y | 0.165 | likely_benign | 0.1431 | benign | -0.509 | Destabilizing | 0.016 | N | 0.238 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.