Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5566 | 16921;16922;16923 | chr2:178732273;178732272;178732271 | chr2:179597000;179596999;179596998 |
N2AB | 5249 | 15970;15971;15972 | chr2:178732273;178732272;178732271 | chr2:179597000;179596999;179596998 |
N2A | 4322 | 13189;13190;13191 | chr2:178732273;178732272;178732271 | chr2:179597000;179596999;179596998 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | None | N | 0.357 | 0.179 | 0.300784259202 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3137 | likely_benign | 0.3683 | ambiguous | -0.658 | Destabilizing | 0.035 | N | 0.464 | neutral | None | None | None | None | N |
K/C | 0.6723 | likely_pathogenic | 0.7398 | pathogenic | -0.826 | Destabilizing | 0.824 | D | 0.616 | neutral | None | None | None | None | N |
K/D | 0.6269 | likely_pathogenic | 0.6466 | pathogenic | -0.435 | Destabilizing | 0.081 | N | 0.47 | neutral | None | None | None | None | N |
K/E | 0.1702 | likely_benign | 0.1855 | benign | -0.346 | Destabilizing | None | N | 0.319 | neutral | N | 0.516223222 | None | None | N |
K/F | 0.7023 | likely_pathogenic | 0.755 | pathogenic | -0.551 | Destabilizing | 0.555 | D | 0.601 | neutral | None | None | None | None | N |
K/G | 0.4937 | ambiguous | 0.5482 | ambiguous | -0.997 | Destabilizing | 0.149 | N | 0.546 | neutral | None | None | None | None | N |
K/H | 0.2523 | likely_benign | 0.2782 | benign | -1.403 | Destabilizing | 0.38 | N | 0.571 | neutral | None | None | None | None | N |
K/I | 0.2881 | likely_benign | 0.3267 | benign | 0.207 | Stabilizing | 0.188 | N | 0.615 | neutral | N | 0.487431211 | None | None | N |
K/L | 0.3096 | likely_benign | 0.3627 | ambiguous | 0.207 | Stabilizing | 0.081 | N | 0.547 | neutral | None | None | None | None | N |
K/M | 0.1965 | likely_benign | 0.2221 | benign | 0.207 | Stabilizing | 0.824 | D | 0.566 | neutral | None | None | None | None | N |
K/N | 0.3811 | ambiguous | 0.4057 | ambiguous | -0.611 | Destabilizing | 0.117 | N | 0.439 | neutral | N | 0.493974897 | None | None | N |
K/P | 0.8183 | likely_pathogenic | 0.8683 | pathogenic | -0.052 | Destabilizing | 0.555 | D | 0.589 | neutral | None | None | None | None | N |
K/Q | 0.1256 | likely_benign | 0.137 | benign | -0.79 | Destabilizing | 0.001 | N | 0.316 | neutral | N | 0.494213154 | None | None | N |
K/R | 0.0765 | likely_benign | 0.0791 | benign | -0.65 | Destabilizing | None | N | 0.333 | neutral | N | 0.479475775 | None | None | N |
K/S | 0.3715 | ambiguous | 0.4165 | ambiguous | -1.275 | Destabilizing | 0.007 | N | 0.343 | neutral | None | None | None | None | N |
K/T | 0.1357 | likely_benign | 0.151 | benign | -0.989 | Destabilizing | None | N | 0.357 | neutral | N | 0.483615641 | None | None | N |
K/V | 0.261 | likely_benign | 0.3023 | benign | -0.052 | Destabilizing | 0.081 | N | 0.581 | neutral | None | None | None | None | N |
K/W | 0.7249 | likely_pathogenic | 0.7681 | pathogenic | -0.409 | Destabilizing | 0.935 | D | 0.635 | neutral | None | None | None | None | N |
K/Y | 0.5847 | likely_pathogenic | 0.6373 | pathogenic | -0.073 | Destabilizing | 0.555 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.