Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5567 | 16924;16925;16926 | chr2:178732270;178732269;178732268 | chr2:179596997;179596996;179596995 |
N2AB | 5250 | 15973;15974;15975 | chr2:178732270;178732269;178732268 | chr2:179596997;179596996;179596995 |
N2A | 4323 | 13192;13193;13194 | chr2:178732270;178732269;178732268 | chr2:179596997;179596996;179596995 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.026 | D | 0.302 | 0.354 | 0.508398094826 | gnomAD-4.0.0 | 1.59152E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77346E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5884 | likely_pathogenic | 0.624 | pathogenic | -1.7 | Destabilizing | 0.103 | N | 0.367 | neutral | N | 0.484121952 | None | None | N |
V/C | 0.9527 | likely_pathogenic | 0.9588 | pathogenic | -1.479 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
V/D | 0.9869 | likely_pathogenic | 0.989 | pathogenic | -1.362 | Destabilizing | 0.988 | D | 0.821 | deleterious | None | None | None | None | N |
V/E | 0.9638 | likely_pathogenic | 0.9698 | pathogenic | -1.147 | Destabilizing | 0.984 | D | 0.781 | deleterious | D | 0.55024408 | None | None | N |
V/F | 0.5357 | ambiguous | 0.5582 | ambiguous | -0.944 | Destabilizing | 0.976 | D | 0.791 | deleterious | None | None | None | None | N |
V/G | 0.7542 | likely_pathogenic | 0.7848 | pathogenic | -2.233 | Highly Destabilizing | 0.968 | D | 0.777 | deleterious | D | 0.581354144 | None | None | N |
V/H | 0.9875 | likely_pathogenic | 0.9892 | pathogenic | -1.889 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/I | 0.1087 | likely_benign | 0.1164 | benign | -0.226 | Destabilizing | 0.026 | N | 0.311 | neutral | N | 0.475499682 | None | None | N |
V/K | 0.9758 | likely_pathogenic | 0.9797 | pathogenic | -1.055 | Destabilizing | 0.988 | D | 0.78 | deleterious | None | None | None | None | N |
V/L | 0.4979 | ambiguous | 0.5167 | ambiguous | -0.226 | Destabilizing | 0.026 | N | 0.302 | neutral | D | 0.54285589 | None | None | N |
V/M | 0.466 | ambiguous | 0.512 | ambiguous | -0.522 | Destabilizing | 0.976 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/N | 0.9629 | likely_pathogenic | 0.9708 | pathogenic | -1.29 | Destabilizing | 0.996 | D | 0.804 | deleterious | None | None | None | None | N |
V/P | 0.9738 | likely_pathogenic | 0.9773 | pathogenic | -0.688 | Destabilizing | 0.988 | D | 0.786 | deleterious | None | None | None | None | N |
V/Q | 0.9667 | likely_pathogenic | 0.9721 | pathogenic | -1.1 | Destabilizing | 0.996 | D | 0.774 | deleterious | None | None | None | None | N |
V/R | 0.9596 | likely_pathogenic | 0.9631 | pathogenic | -1.09 | Destabilizing | 0.988 | D | 0.813 | deleterious | None | None | None | None | N |
V/S | 0.8776 | likely_pathogenic | 0.9037 | pathogenic | -2.082 | Highly Destabilizing | 0.952 | D | 0.756 | deleterious | None | None | None | None | N |
V/T | 0.7596 | likely_pathogenic | 0.8057 | pathogenic | -1.704 | Destabilizing | 0.919 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/W | 0.9823 | likely_pathogenic | 0.9855 | pathogenic | -1.283 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
V/Y | 0.9058 | likely_pathogenic | 0.9113 | pathogenic | -0.899 | Destabilizing | 0.996 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.