Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5582 | 16969;16970;16971 | chr2:178732225;178732224;178732223 | chr2:179596952;179596951;179596950 |
N2AB | 5265 | 16018;16019;16020 | chr2:178732225;178732224;178732223 | chr2:179596952;179596951;179596950 |
N2A | 4338 | 13237;13238;13239 | chr2:178732225;178732224;178732223 | chr2:179596952;179596951;179596950 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.837 | N | 0.359 | 0.318 | 0.522611632499 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85816E-06 | 0 | 0 |
R/I | rs1232658661 | None | 0.719 | N | 0.424 | 0.309 | 0.602640947006 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/I | rs1232658661 | None | 0.719 | N | 0.424 | 0.309 | 0.602640947006 | gnomAD-4.0.0 | 6.57125E-06 | None | None | None | None | N | None | 0 | 6.54707E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2176 | likely_benign | 0.2545 | benign | 0.072 | Stabilizing | 0.737 | D | 0.369 | neutral | None | None | None | None | N |
R/C | 0.1549 | likely_benign | 0.1687 | benign | -0.005 | Destabilizing | 0.998 | D | 0.338 | neutral | None | None | None | None | N |
R/D | 0.3791 | ambiguous | 0.4306 | ambiguous | -0.126 | Destabilizing | 0.773 | D | 0.407 | neutral | None | None | None | None | N |
R/E | 0.191 | likely_benign | 0.2103 | benign | -0.067 | Destabilizing | 0.872 | D | 0.293 | neutral | None | None | None | None | N |
R/F | 0.356 | ambiguous | 0.3929 | ambiguous | -0.142 | Destabilizing | 0.96 | D | 0.381 | neutral | None | None | None | None | N |
R/G | 0.1534 | likely_benign | 0.1772 | benign | -0.119 | Destabilizing | 0.837 | D | 0.359 | neutral | N | 0.487479183 | None | None | N |
R/H | 0.0838 | likely_benign | 0.091 | benign | -0.65 | Destabilizing | 0.98 | D | 0.338 | neutral | None | None | None | None | N |
R/I | 0.1421 | likely_benign | 0.1585 | benign | 0.537 | Stabilizing | 0.719 | D | 0.424 | neutral | N | 0.488556619 | None | None | N |
R/K | 0.0845 | likely_benign | 0.0914 | benign | 0.011 | Stabilizing | 0.679 | D | 0.354 | neutral | N | 0.431815114 | None | None | N |
R/L | 0.1708 | likely_benign | 0.1919 | benign | 0.537 | Stabilizing | 0.584 | D | 0.364 | neutral | None | None | None | None | N |
R/M | 0.1545 | likely_benign | 0.1737 | benign | 0.119 | Stabilizing | 0.209 | N | 0.281 | neutral | None | None | None | None | N |
R/N | 0.3177 | likely_benign | 0.3696 | ambiguous | 0.262 | Stabilizing | 0.083 | N | 0.255 | neutral | None | None | None | None | N |
R/P | 0.8447 | likely_pathogenic | 0.8712 | pathogenic | 0.402 | Stabilizing | 0.993 | D | 0.379 | neutral | None | None | None | None | N |
R/Q | 0.0815 | likely_benign | 0.0869 | benign | 0.164 | Stabilizing | 0.932 | D | 0.343 | neutral | None | None | None | None | N |
R/S | 0.2628 | likely_benign | 0.3062 | benign | -0.029 | Destabilizing | 0.514 | D | 0.368 | neutral | N | 0.456537414 | None | None | N |
R/T | 0.1177 | likely_benign | 0.1348 | benign | 0.156 | Stabilizing | 0.064 | N | 0.247 | neutral | N | 0.42806552 | None | None | N |
R/V | 0.1964 | likely_benign | 0.2212 | benign | 0.402 | Stabilizing | 0.584 | D | 0.368 | neutral | None | None | None | None | N |
R/W | 0.1404 | likely_benign | 0.15 | benign | -0.227 | Destabilizing | 0.998 | D | 0.34 | neutral | None | None | None | None | N |
R/Y | 0.2669 | likely_benign | 0.2966 | benign | 0.181 | Stabilizing | 0.993 | D | 0.373 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.