Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5583 | 16972;16973;16974 | chr2:178732222;178732221;178732220 | chr2:179596949;179596948;179596947 |
N2AB | 5266 | 16021;16022;16023 | chr2:178732222;178732221;178732220 | chr2:179596949;179596948;179596947 |
N2A | 4339 | 13240;13241;13242 | chr2:178732222;178732221;178732220 | chr2:179596949;179596948;179596947 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.633 | 0.333 | 0.564798353577 | gnomAD-4.0.0 | 1.59117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85811E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1518 | likely_benign | 0.1585 | benign | -0.527 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.488619299 | None | None | N |
E/C | 0.8707 | likely_pathogenic | 0.8652 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/D | 0.3175 | likely_benign | 0.3167 | benign | -0.565 | Destabilizing | 0.999 | D | 0.49 | neutral | N | 0.497062315 | None | None | N |
E/F | 0.798 | likely_pathogenic | 0.7997 | pathogenic | 0.041 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/G | 0.261 | likely_benign | 0.277 | benign | -0.807 | Destabilizing | 1.0 | D | 0.646 | neutral | D | 0.527754324 | None | None | N |
E/H | 0.5813 | likely_pathogenic | 0.5749 | pathogenic | 0.3 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
E/I | 0.2979 | likely_benign | 0.2899 | benign | 0.212 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/K | 0.1491 | likely_benign | 0.1466 | benign | -0.039 | Destabilizing | 0.999 | D | 0.633 | neutral | N | 0.517396658 | None | None | N |
E/L | 0.3472 | ambiguous | 0.3582 | ambiguous | 0.212 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/M | 0.3876 | ambiguous | 0.3925 | ambiguous | 0.193 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
E/N | 0.4211 | ambiguous | 0.4305 | ambiguous | -0.618 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/P | 0.3442 | ambiguous | 0.3566 | ambiguous | -0.014 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/Q | 0.1414 | likely_benign | 0.1409 | benign | -0.511 | Destabilizing | 1.0 | D | 0.601 | neutral | N | 0.487707473 | None | None | N |
E/R | 0.283 | likely_benign | 0.2697 | benign | 0.387 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/S | 0.3474 | ambiguous | 0.354 | ambiguous | -0.805 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
E/T | 0.2949 | likely_benign | 0.3024 | benign | -0.565 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/V | 0.1762 | likely_benign | 0.1745 | benign | -0.014 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.486999911 | None | None | N |
E/W | 0.9181 | likely_pathogenic | 0.9184 | pathogenic | 0.314 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/Y | 0.7119 | likely_pathogenic | 0.7068 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.