Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5592 | 16999;17000;17001 | chr2:178732195;178732194;178732193 | chr2:179596922;179596921;179596920 |
N2AB | 5275 | 16048;16049;16050 | chr2:178732195;178732194;178732193 | chr2:179596922;179596921;179596920 |
N2A | 4348 | 13267;13268;13269 | chr2:178732195;178732194;178732193 | chr2:179596922;179596921;179596920 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs879188937 | -0.86 | None | N | 0.083 | 0.087 | 0.391930172978 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
M/I | rs879188937 | -0.86 | None | N | 0.083 | 0.087 | 0.391930172978 | gnomAD-4.0.0 | 8.89456E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.1693E-05 | 0 | 0 |
M/V | None | None | 0.004 | N | 0.213 | 0.144 | 0.450733807028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.5549 | ambiguous | 0.5735 | pathogenic | -2.218 | Highly Destabilizing | 0.067 | N | 0.347 | neutral | None | None | None | None | N |
M/C | 0.8154 | likely_pathogenic | 0.8153 | pathogenic | -1.604 | Destabilizing | 0.935 | D | 0.443 | neutral | None | None | None | None | N |
M/D | 0.9011 | likely_pathogenic | 0.9074 | pathogenic | -0.985 | Destabilizing | 0.555 | D | 0.555 | neutral | None | None | None | None | N |
M/E | 0.643 | likely_pathogenic | 0.6563 | pathogenic | -0.866 | Destabilizing | 0.555 | D | 0.496 | neutral | None | None | None | None | N |
M/F | 0.2859 | likely_benign | 0.282 | benign | -0.887 | Destabilizing | 0.149 | N | 0.404 | neutral | None | None | None | None | N |
M/G | 0.7301 | likely_pathogenic | 0.7532 | pathogenic | -2.63 | Highly Destabilizing | 0.262 | N | 0.54 | neutral | None | None | None | None | N |
M/H | 0.6311 | likely_pathogenic | 0.642 | pathogenic | -1.799 | Destabilizing | 0.935 | D | 0.501 | neutral | None | None | None | None | N |
M/I | 0.3197 | likely_benign | 0.3265 | benign | -1.089 | Destabilizing | None | N | 0.083 | neutral | N | 0.464868895 | None | None | N |
M/K | 0.2786 | likely_benign | 0.2822 | benign | -0.982 | Destabilizing | 0.211 | N | 0.426 | neutral | N | 0.510357631 | None | None | N |
M/L | 0.1429 | likely_benign | 0.1469 | benign | -1.089 | Destabilizing | None | N | 0.077 | neutral | N | 0.477126117 | None | None | N |
M/N | 0.6204 | likely_pathogenic | 0.6333 | pathogenic | -1.006 | Destabilizing | 0.791 | D | 0.497 | neutral | None | None | None | None | N |
M/P | 0.7736 | likely_pathogenic | 0.7829 | pathogenic | -1.442 | Destabilizing | 0.791 | D | 0.499 | neutral | None | None | None | None | N |
M/Q | 0.3319 | likely_benign | 0.3503 | ambiguous | -0.919 | Destabilizing | 0.791 | D | 0.436 | neutral | None | None | None | None | N |
M/R | 0.2762 | likely_benign | 0.287 | benign | -0.71 | Destabilizing | 0.484 | N | 0.452 | neutral | N | 0.493658955 | None | None | N |
M/S | 0.5458 | ambiguous | 0.5628 | ambiguous | -1.69 | Destabilizing | 0.262 | N | 0.373 | neutral | None | None | None | None | N |
M/T | 0.3653 | ambiguous | 0.3657 | ambiguous | -1.444 | Destabilizing | 0.117 | N | 0.383 | neutral | D | 0.525093422 | None | None | N |
M/V | 0.1465 | likely_benign | 0.1497 | benign | -1.442 | Destabilizing | 0.004 | N | 0.213 | neutral | N | 0.503096423 | None | None | N |
M/W | 0.6296 | likely_pathogenic | 0.6389 | pathogenic | -0.925 | Destabilizing | 0.935 | D | 0.445 | neutral | None | None | None | None | N |
M/Y | 0.5566 | ambiguous | 0.5592 | ambiguous | -0.98 | Destabilizing | 0.555 | D | 0.459 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.