Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5594 | 17005;17006;17007 | chr2:178732189;178732188;178732187 | chr2:179596916;179596915;179596914 |
N2AB | 5277 | 16054;16055;16056 | chr2:178732189;178732188;178732187 | chr2:179596916;179596915;179596914 |
N2A | 4350 | 13273;13274;13275 | chr2:178732189;178732188;178732187 | chr2:179596916;179596915;179596914 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1210237703 | -1.801 | 0.065 | N | 0.516 | 0.241 | 0.73377832567 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
F/S | rs1210237703 | -1.801 | 0.065 | N | 0.516 | 0.241 | 0.73377832567 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6604 | likely_pathogenic | 0.7763 | pathogenic | -1.863 | Destabilizing | 0.031 | N | 0.466 | neutral | None | None | None | None | N |
F/C | 0.5574 | ambiguous | 0.701 | pathogenic | -1.102 | Destabilizing | 0.993 | D | 0.667 | neutral | N | 0.50587418 | None | None | N |
F/D | 0.8787 | likely_pathogenic | 0.9286 | pathogenic | 0.041 | Stabilizing | 0.704 | D | 0.689 | prob.neutral | None | None | None | None | N |
F/E | 0.9013 | likely_pathogenic | 0.9427 | pathogenic | 0.12 | Stabilizing | 0.543 | D | 0.639 | neutral | None | None | None | None | N |
F/G | 0.8646 | likely_pathogenic | 0.9232 | pathogenic | -2.179 | Highly Destabilizing | 0.704 | D | 0.641 | neutral | None | None | None | None | N |
F/H | 0.7106 | likely_pathogenic | 0.8057 | pathogenic | -0.561 | Destabilizing | 0.944 | D | 0.633 | neutral | None | None | None | None | N |
F/I | 0.3148 | likely_benign | 0.4011 | ambiguous | -0.94 | Destabilizing | 0.473 | N | 0.503 | neutral | D | 0.52870973 | None | None | N |
F/K | 0.9113 | likely_pathogenic | 0.9542 | pathogenic | -0.904 | Destabilizing | 0.543 | D | 0.671 | neutral | None | None | None | None | N |
F/L | 0.8488 | likely_pathogenic | 0.9058 | pathogenic | -0.94 | Destabilizing | 0.006 | N | 0.265 | neutral | D | 0.530960601 | None | None | N |
F/M | 0.5624 | ambiguous | 0.6683 | pathogenic | -0.778 | Destabilizing | 0.893 | D | 0.628 | neutral | None | None | None | None | N |
F/N | 0.761 | likely_pathogenic | 0.8444 | pathogenic | -0.907 | Destabilizing | 0.893 | D | 0.693 | prob.neutral | None | None | None | None | N |
F/P | 0.9844 | likely_pathogenic | 0.9921 | pathogenic | -1.237 | Destabilizing | 0.944 | D | 0.688 | prob.neutral | None | None | None | None | N |
F/Q | 0.8646 | likely_pathogenic | 0.923 | pathogenic | -0.928 | Destabilizing | 0.176 | N | 0.534 | neutral | None | None | None | None | N |
F/R | 0.813 | likely_pathogenic | 0.8917 | pathogenic | -0.369 | Destabilizing | 0.893 | D | 0.69 | prob.neutral | None | None | None | None | N |
F/S | 0.5235 | ambiguous | 0.6545 | pathogenic | -1.801 | Destabilizing | 0.065 | N | 0.516 | neutral | N | 0.516164507 | None | None | N |
F/T | 0.5515 | ambiguous | 0.6677 | pathogenic | -1.628 | Destabilizing | 0.704 | D | 0.642 | neutral | None | None | None | None | N |
F/V | 0.2919 | likely_benign | 0.378 | ambiguous | -1.237 | Destabilizing | 0.023 | N | 0.369 | neutral | N | 0.520780893 | None | None | N |
F/W | 0.5686 | likely_pathogenic | 0.6669 | pathogenic | -0.187 | Destabilizing | 0.995 | D | 0.625 | neutral | None | None | None | None | N |
F/Y | 0.2606 | likely_benign | 0.3262 | benign | -0.358 | Destabilizing | 0.784 | D | 0.569 | neutral | N | 0.521821043 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.