Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5595 | 17008;17009;17010 | chr2:178732186;178732185;178732184 | chr2:179596913;179596912;179596911 |
N2AB | 5278 | 16057;16058;16059 | chr2:178732186;178732185;178732184 | chr2:179596913;179596912;179596911 |
N2A | 4351 | 13276;13277;13278 | chr2:178732186;178732185;178732184 | chr2:179596913;179596912;179596911 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.002 | D | 0.188 | 0.108 | 0.358540694251 | gnomAD-4.0.0 | 1.59122E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85825E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0755 | likely_benign | 0.0883 | benign | -0.379 | Destabilizing | None | N | 0.123 | neutral | D | 0.533846191 | None | None | N |
V/C | 0.4617 | ambiguous | 0.554 | ambiguous | -0.72 | Destabilizing | 0.356 | N | 0.307 | neutral | None | None | None | None | N |
V/D | 0.1062 | likely_benign | 0.121 | benign | 0.3 | Stabilizing | None | N | 0.243 | neutral | None | None | None | None | N |
V/E | 0.1011 | likely_benign | 0.1084 | benign | 0.212 | Stabilizing | 0.001 | N | 0.233 | neutral | N | 0.450150159 | None | None | N |
V/F | 0.0926 | likely_benign | 0.1034 | benign | -0.471 | Destabilizing | 0.214 | N | 0.38 | neutral | None | None | None | None | N |
V/G | 0.0986 | likely_benign | 0.1123 | benign | -0.513 | Destabilizing | None | N | 0.219 | neutral | N | 0.485150954 | None | None | N |
V/H | 0.1966 | likely_benign | 0.2334 | benign | -0.017 | Destabilizing | 0.356 | N | 0.376 | neutral | None | None | None | None | N |
V/I | 0.0699 | likely_benign | 0.0744 | benign | -0.172 | Destabilizing | 0.016 | N | 0.185 | neutral | None | None | None | None | N |
V/K | 0.1256 | likely_benign | 0.1442 | benign | -0.263 | Destabilizing | 0.016 | N | 0.291 | neutral | None | None | None | None | N |
V/L | 0.0913 | likely_benign | 0.106 | benign | -0.172 | Destabilizing | None | N | 0.126 | neutral | N | 0.456694916 | None | None | N |
V/M | 0.0926 | likely_benign | 0.1046 | benign | -0.394 | Destabilizing | 0.002 | N | 0.188 | neutral | D | 0.534886341 | None | None | N |
V/N | 0.1043 | likely_benign | 0.1214 | benign | -0.126 | Destabilizing | 0.072 | N | 0.372 | neutral | None | None | None | None | N |
V/P | 0.3587 | ambiguous | 0.4578 | ambiguous | -0.207 | Destabilizing | 0.072 | N | 0.392 | neutral | None | None | None | None | N |
V/Q | 0.1141 | likely_benign | 0.1255 | benign | -0.271 | Destabilizing | 0.072 | N | 0.39 | neutral | None | None | None | None | N |
V/R | 0.0972 | likely_benign | 0.1068 | benign | 0.127 | Stabilizing | None | N | 0.218 | neutral | None | None | None | None | N |
V/S | 0.0773 | likely_benign | 0.0867 | benign | -0.572 | Destabilizing | 0.016 | N | 0.269 | neutral | None | None | None | None | N |
V/T | 0.0807 | likely_benign | 0.0877 | benign | -0.549 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | N |
V/W | 0.4056 | ambiguous | 0.4735 | ambiguous | -0.554 | Destabilizing | 0.864 | D | 0.362 | neutral | None | None | None | None | N |
V/Y | 0.2552 | likely_benign | 0.3094 | benign | -0.26 | Destabilizing | 0.356 | N | 0.353 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.