Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5596 | 17011;17012;17013 | chr2:178732183;178732182;178732181 | chr2:179596910;179596909;179596908 |
N2AB | 5279 | 16060;16061;16062 | chr2:178732183;178732182;178732181 | chr2:179596910;179596909;179596908 |
N2A | 4352 | 13279;13280;13281 | chr2:178732183;178732182;178732181 | chr2:179596910;179596909;179596908 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.042 | N | 0.257 | 0.078 | 0.183819452728 | gnomAD-4.0.0 | 4.78939E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29627E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.104 | likely_benign | 0.1127 | benign | 0.008 | Stabilizing | 0.042 | N | 0.257 | neutral | N | 0.444434042 | None | None | N |
E/C | 0.6772 | likely_pathogenic | 0.7144 | pathogenic | -0.188 | Destabilizing | 0.958 | D | 0.169 | neutral | None | None | None | None | N |
E/D | 0.0655 | likely_benign | 0.0659 | benign | -0.433 | Destabilizing | None | N | 0.104 | neutral | N | 0.338997301 | None | None | N |
E/F | 0.6166 | likely_pathogenic | 0.6528 | pathogenic | -0.08 | Destabilizing | 0.859 | D | 0.2 | neutral | None | None | None | None | N |
E/G | 0.0668 | likely_benign | 0.0702 | benign | -0.082 | Destabilizing | None | N | 0.125 | neutral | N | 0.402216486 | None | None | N |
E/H | 0.2698 | likely_benign | 0.2992 | benign | 0.515 | Stabilizing | 0.667 | D | 0.206 | neutral | None | None | None | None | N |
E/I | 0.4234 | ambiguous | 0.4658 | ambiguous | 0.183 | Stabilizing | 0.667 | D | 0.262 | neutral | None | None | None | None | N |
E/K | 0.1162 | likely_benign | 0.1248 | benign | 0.41 | Stabilizing | None | N | 0.137 | neutral | N | 0.46149965 | None | None | N |
E/L | 0.3363 | likely_benign | 0.3863 | ambiguous | 0.183 | Stabilizing | 0.22 | N | 0.321 | neutral | None | None | None | None | N |
E/M | 0.4178 | ambiguous | 0.4623 | ambiguous | -0.019 | Destabilizing | 0.859 | D | 0.181 | neutral | None | None | None | None | N |
E/N | 0.1092 | likely_benign | 0.1109 | benign | 0.157 | Stabilizing | None | N | 0.102 | neutral | None | None | None | None | N |
E/P | 0.3585 | ambiguous | 0.3805 | ambiguous | 0.141 | Stabilizing | 0.364 | N | 0.338 | neutral | None | None | None | None | N |
E/Q | 0.1089 | likely_benign | 0.1161 | benign | 0.163 | Stabilizing | 0.175 | N | 0.245 | neutral | N | 0.427541792 | None | None | N |
E/R | 0.1705 | likely_benign | 0.1828 | benign | 0.582 | Stabilizing | 0.124 | N | 0.216 | neutral | None | None | None | None | N |
E/S | 0.1084 | likely_benign | 0.1155 | benign | 0.055 | Stabilizing | 0.055 | N | 0.178 | neutral | None | None | None | None | N |
E/T | 0.1967 | likely_benign | 0.217 | benign | 0.141 | Stabilizing | 0.104 | N | 0.266 | neutral | None | None | None | None | N |
E/V | 0.2616 | likely_benign | 0.2873 | benign | 0.141 | Stabilizing | 0.301 | N | 0.318 | neutral | N | 0.462713159 | None | None | N |
E/W | 0.7535 | likely_pathogenic | 0.7755 | pathogenic | -0.063 | Destabilizing | 0.958 | D | 0.168 | neutral | None | None | None | None | N |
E/Y | 0.4158 | ambiguous | 0.4363 | ambiguous | 0.13 | Stabilizing | 0.859 | D | 0.21 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.