Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5599 | 17020;17021;17022 | chr2:178732174;178732173;178732172 | chr2:179596901;179596900;179596899 |
N2AB | 5282 | 16069;16070;16071 | chr2:178732174;178732173;178732172 | chr2:179596901;179596900;179596899 |
N2A | 4355 | 13288;13289;13290 | chr2:178732174;178732173;178732172 | chr2:179596901;179596900;179596899 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1194013551 | None | 0.996 | N | 0.628 | 0.31 | 0.343788945184 | gnomAD-4.0.0 | 3.1825E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86566E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7407 | likely_pathogenic | 0.7508 | pathogenic | -0.638 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
A/D | 0.9716 | likely_pathogenic | 0.9815 | pathogenic | -1.878 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/E | 0.9578 | likely_pathogenic | 0.9675 | pathogenic | -1.655 | Destabilizing | 0.999 | D | 0.779 | deleterious | N | 0.466910289 | None | None | N |
A/F | 0.892 | likely_pathogenic | 0.9011 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/G | 0.2627 | likely_benign | 0.3192 | benign | -1.14 | Destabilizing | 0.998 | D | 0.631 | neutral | N | 0.469831132 | None | None | N |
A/H | 0.9678 | likely_pathogenic | 0.974 | pathogenic | -1.83 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
A/I | 0.7246 | likely_pathogenic | 0.6986 | pathogenic | 0.754 | Stabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
A/K | 0.9846 | likely_pathogenic | 0.9887 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/L | 0.6703 | likely_pathogenic | 0.6693 | pathogenic | 0.754 | Stabilizing | 0.997 | D | 0.695 | prob.neutral | None | None | None | None | N |
A/M | 0.7029 | likely_pathogenic | 0.7117 | pathogenic | 0.456 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
A/N | 0.9284 | likely_pathogenic | 0.9499 | pathogenic | -0.992 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
A/P | 0.885 | likely_pathogenic | 0.8821 | pathogenic | 0.339 | Stabilizing | 1.0 | D | 0.829 | deleterious | N | 0.455553983 | None | None | N |
A/Q | 0.9456 | likely_pathogenic | 0.9537 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/R | 0.9628 | likely_pathogenic | 0.9704 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
A/S | 0.2517 | likely_benign | 0.2777 | benign | -1.399 | Destabilizing | 0.992 | D | 0.622 | neutral | N | 0.488126104 | None | None | N |
A/T | 0.3534 | ambiguous | 0.3611 | ambiguous | -1.034 | Destabilizing | 0.884 | D | 0.48 | neutral | N | 0.45574134 | None | None | N |
A/V | 0.38 | ambiguous | 0.3338 | benign | 0.339 | Stabilizing | 0.996 | D | 0.628 | neutral | N | 0.467097645 | None | None | N |
A/W | 0.9871 | likely_pathogenic | 0.99 | pathogenic | -1.249 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
A/Y | 0.9496 | likely_pathogenic | 0.9574 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.