Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5605 | 17038;17039;17040 | chr2:178732156;178732155;178732154 | chr2:179596883;179596882;179596881 |
N2AB | 5288 | 16087;16088;16089 | chr2:178732156;178732155;178732154 | chr2:179596883;179596882;179596881 |
N2A | 4361 | 13306;13307;13308 | chr2:178732156;178732155;178732154 | chr2:179596883;179596882;179596881 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.001 | N | 0.275 | 0.163 | 0.0884992946249 | gnomAD-4.0.0 | 2.73689E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69848E-06 | 0 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0989 | likely_benign | 0.1137 | benign | -0.325 | Destabilizing | 0.012 | N | 0.374 | neutral | N | 0.463155876 | None | None | N |
D/C | 0.4141 | ambiguous | 0.4492 | ambiguous | 0.182 | Stabilizing | 0.864 | D | 0.367 | neutral | None | None | None | None | N |
D/E | 0.1143 | likely_benign | 0.1212 | benign | -0.282 | Destabilizing | None | N | 0.167 | neutral | N | 0.407339878 | None | None | N |
D/F | 0.4036 | ambiguous | 0.4409 | ambiguous | -0.449 | Destabilizing | 0.628 | D | 0.387 | neutral | None | None | None | None | N |
D/G | 0.0978 | likely_benign | 0.1061 | benign | -0.495 | Destabilizing | 0.012 | N | 0.346 | neutral | N | 0.424656203 | None | None | N |
D/H | 0.1505 | likely_benign | 0.1634 | benign | -0.384 | Destabilizing | 0.295 | N | 0.324 | neutral | N | 0.468793769 | None | None | N |
D/I | 0.2804 | likely_benign | 0.3151 | benign | 0.068 | Stabilizing | 0.356 | N | 0.418 | neutral | None | None | None | None | N |
D/K | 0.1965 | likely_benign | 0.2189 | benign | 0.367 | Stabilizing | 0.001 | N | 0.195 | neutral | None | None | None | None | N |
D/L | 0.2806 | likely_benign | 0.3105 | benign | 0.068 | Stabilizing | 0.072 | N | 0.466 | neutral | None | None | None | None | N |
D/M | 0.4271 | ambiguous | 0.464 | ambiguous | 0.333 | Stabilizing | 0.628 | D | 0.369 | neutral | None | None | None | None | N |
D/N | 0.0721 | likely_benign | 0.0735 | benign | 0.175 | Stabilizing | 0.001 | N | 0.275 | neutral | N | 0.371627008 | None | None | N |
D/P | 0.5822 | likely_pathogenic | 0.6385 | pathogenic | -0.042 | Destabilizing | 0.136 | N | 0.395 | neutral | None | None | None | None | N |
D/Q | 0.2028 | likely_benign | 0.2229 | benign | 0.171 | Stabilizing | 0.003 | N | 0.27 | neutral | None | None | None | None | N |
D/R | 0.2018 | likely_benign | 0.227 | benign | 0.413 | Stabilizing | 0.038 | N | 0.431 | neutral | None | None | None | None | N |
D/S | 0.0852 | likely_benign | 0.0912 | benign | 0.059 | Stabilizing | None | N | 0.141 | neutral | None | None | None | None | N |
D/T | 0.1562 | likely_benign | 0.175 | benign | 0.187 | Stabilizing | 0.038 | N | 0.347 | neutral | None | None | None | None | N |
D/V | 0.1683 | likely_benign | 0.1907 | benign | -0.042 | Destabilizing | 0.055 | N | 0.441 | neutral | N | 0.512237902 | None | None | N |
D/W | 0.7138 | likely_pathogenic | 0.7543 | pathogenic | -0.361 | Destabilizing | 0.864 | D | 0.475 | neutral | None | None | None | None | N |
D/Y | 0.1553 | likely_benign | 0.1669 | benign | -0.224 | Destabilizing | 0.56 | D | 0.392 | neutral | N | 0.488630324 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.