Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5609 | 17050;17051;17052 | chr2:178732144;178732143;178732142 | chr2:179596871;179596870;179596869 |
N2AB | 5292 | 16099;16100;16101 | chr2:178732144;178732143;178732142 | chr2:179596871;179596870;179596869 |
N2A | 4365 | 13318;13319;13320 | chr2:178732144;178732143;178732142 | chr2:179596871;179596870;179596869 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.822 | N | 0.473 | 0.25 | 0.327419511103 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.76781E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs374682077 | 0.85 | 0.963 | N | 0.48 | 0.29 | None | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 1.65399E-04 | 2.83E-05 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.56E-05 | 1.40647E-04 |
E/K | rs374682077 | 0.85 | 0.963 | N | 0.48 | 0.29 | None | gnomAD-3.1.2 | 7.89E-05 | None | None | None | None | I | None | 2.41301E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78927E-04 |
E/K | rs374682077 | 0.85 | 0.963 | N | 0.48 | 0.29 | None | gnomAD-4.0.0 | 2.04492E-05 | None | None | None | None | I | None | 1.73264E-04 | 1.66639E-05 | None | 0 | 4.45752E-05 | None | 3.12461E-05 | 0 | 1.10193E-05 | 1.0982E-05 | 1.60067E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1163 | likely_benign | 0.1334 | benign | -0.378 | Destabilizing | 0.058 | N | 0.323 | neutral | N | 0.511525826 | None | None | I |
E/C | 0.7109 | likely_pathogenic | 0.7586 | pathogenic | -0.043 | Destabilizing | 0.998 | D | 0.652 | neutral | None | None | None | None | I |
E/D | 0.0938 | likely_benign | 0.1012 | benign | -0.252 | Destabilizing | 0.014 | N | 0.297 | neutral | N | 0.500058039 | None | None | I |
E/F | 0.582 | likely_pathogenic | 0.643 | pathogenic | -0.298 | Destabilizing | 0.993 | D | 0.633 | neutral | None | None | None | None | I |
E/G | 0.1027 | likely_benign | 0.1124 | benign | -0.542 | Destabilizing | 0.822 | D | 0.473 | neutral | N | 0.47552157 | None | None | I |
E/H | 0.2955 | likely_benign | 0.3389 | benign | 0.058 | Stabilizing | 0.998 | D | 0.46 | neutral | None | None | None | None | I |
E/I | 0.2864 | likely_benign | 0.3378 | benign | 0.012 | Stabilizing | 0.978 | D | 0.631 | neutral | None | None | None | None | I |
E/K | 0.0982 | likely_benign | 0.1105 | benign | 0.387 | Stabilizing | 0.963 | D | 0.48 | neutral | N | 0.464165265 | None | None | I |
E/L | 0.2859 | likely_benign | 0.3418 | ambiguous | 0.012 | Stabilizing | 0.956 | D | 0.551 | neutral | None | None | None | None | I |
E/M | 0.3404 | ambiguous | 0.3964 | ambiguous | 0.104 | Stabilizing | 0.998 | D | 0.565 | neutral | None | None | None | None | I |
E/N | 0.1707 | likely_benign | 0.19 | benign | 0.047 | Stabilizing | 0.915 | D | 0.461 | neutral | None | None | None | None | I |
E/P | 0.4301 | ambiguous | 0.5049 | ambiguous | -0.1 | Destabilizing | 0.978 | D | 0.493 | neutral | None | None | None | None | I |
E/Q | 0.1109 | likely_benign | 0.1262 | benign | 0.084 | Stabilizing | 0.976 | D | 0.466 | neutral | N | 0.473724371 | None | None | I |
E/R | 0.1577 | likely_benign | 0.176 | benign | 0.577 | Stabilizing | 0.978 | D | 0.475 | neutral | None | None | None | None | I |
E/S | 0.1341 | likely_benign | 0.1481 | benign | -0.096 | Destabilizing | 0.754 | D | 0.456 | neutral | None | None | None | None | I |
E/T | 0.1527 | likely_benign | 0.1777 | benign | 0.047 | Stabilizing | 0.86 | D | 0.453 | neutral | None | None | None | None | I |
E/V | 0.178 | likely_benign | 0.21 | benign | -0.1 | Destabilizing | 0.942 | D | 0.451 | neutral | N | 0.503794043 | None | None | I |
E/W | 0.6943 | likely_pathogenic | 0.7444 | pathogenic | -0.159 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/Y | 0.4515 | ambiguous | 0.5048 | ambiguous | -0.062 | Destabilizing | 0.993 | D | 0.576 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.