Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC560917050;17051;17052 chr2:178732144;178732143;178732142chr2:179596871;179596870;179596869
N2AB529216099;16100;16101 chr2:178732144;178732143;178732142chr2:179596871;179596870;179596869
N2A436513318;13319;13320 chr2:178732144;178732143;178732142chr2:179596871;179596870;179596869
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Ig-39
  • Domain position: 67
  • Structural Position: 148
  • Q(SASA): 0.5174
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/G None None 0.822 N 0.473 0.25 0.327419511103 gnomAD-4.0.0 1.59132E-06 None None None None I None 0 0 None 4.76781E-05 0 None 0 0 0 0 0
E/K rs374682077 0.85 0.963 N 0.48 0.29 None gnomAD-2.1.1 3.22E-05 None None None None I None 1.65399E-04 2.83E-05 None 0 0 None 3.27E-05 None 0 1.56E-05 1.40647E-04
E/K rs374682077 0.85 0.963 N 0.48 0.29 None gnomAD-3.1.2 7.89E-05 None None None None I None 2.41301E-04 0 0 0 0 None 0 0 1.47E-05 0 4.78927E-04
E/K rs374682077 0.85 0.963 N 0.48 0.29 None gnomAD-4.0.0 2.04492E-05 None None None None I None 1.73264E-04 1.66639E-05 None 0 4.45752E-05 None 3.12461E-05 0 1.10193E-05 1.0982E-05 1.60067E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1163 likely_benign 0.1334 benign -0.378 Destabilizing 0.058 N 0.323 neutral N 0.511525826 None None I
E/C 0.7109 likely_pathogenic 0.7586 pathogenic -0.043 Destabilizing 0.998 D 0.652 neutral None None None None I
E/D 0.0938 likely_benign 0.1012 benign -0.252 Destabilizing 0.014 N 0.297 neutral N 0.500058039 None None I
E/F 0.582 likely_pathogenic 0.643 pathogenic -0.298 Destabilizing 0.993 D 0.633 neutral None None None None I
E/G 0.1027 likely_benign 0.1124 benign -0.542 Destabilizing 0.822 D 0.473 neutral N 0.47552157 None None I
E/H 0.2955 likely_benign 0.3389 benign 0.058 Stabilizing 0.998 D 0.46 neutral None None None None I
E/I 0.2864 likely_benign 0.3378 benign 0.012 Stabilizing 0.978 D 0.631 neutral None None None None I
E/K 0.0982 likely_benign 0.1105 benign 0.387 Stabilizing 0.963 D 0.48 neutral N 0.464165265 None None I
E/L 0.2859 likely_benign 0.3418 ambiguous 0.012 Stabilizing 0.956 D 0.551 neutral None None None None I
E/M 0.3404 ambiguous 0.3964 ambiguous 0.104 Stabilizing 0.998 D 0.565 neutral None None None None I
E/N 0.1707 likely_benign 0.19 benign 0.047 Stabilizing 0.915 D 0.461 neutral None None None None I
E/P 0.4301 ambiguous 0.5049 ambiguous -0.1 Destabilizing 0.978 D 0.493 neutral None None None None I
E/Q 0.1109 likely_benign 0.1262 benign 0.084 Stabilizing 0.976 D 0.466 neutral N 0.473724371 None None I
E/R 0.1577 likely_benign 0.176 benign 0.577 Stabilizing 0.978 D 0.475 neutral None None None None I
E/S 0.1341 likely_benign 0.1481 benign -0.096 Destabilizing 0.754 D 0.456 neutral None None None None I
E/T 0.1527 likely_benign 0.1777 benign 0.047 Stabilizing 0.86 D 0.453 neutral None None None None I
E/V 0.178 likely_benign 0.21 benign -0.1 Destabilizing 0.942 D 0.451 neutral N 0.503794043 None None I
E/W 0.6943 likely_pathogenic 0.7444 pathogenic -0.159 Destabilizing 0.998 D 0.691 prob.neutral None None None None I
E/Y 0.4515 ambiguous 0.5048 ambiguous -0.062 Destabilizing 0.993 D 0.576 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.