Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5610 | 17053;17054;17055 | chr2:178732141;178732140;178732139 | chr2:179596868;179596867;179596866 |
N2AB | 5293 | 16102;16103;16104 | chr2:178732141;178732140;178732139 | chr2:179596868;179596867;179596866 |
N2A | 4366 | 13321;13322;13323 | chr2:178732141;178732140;178732139 | chr2:179596868;179596867;179596866 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.999 | D | 0.789 | 0.586 | 0.718595846919 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85855E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4707 | ambiguous | 0.5135 | ambiguous | -0.202 | Destabilizing | 0.999 | D | 0.83 | deleterious | D | 0.626692306 | None | None | N |
D/C | 0.8318 | likely_pathogenic | 0.854 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
D/E | 0.4236 | ambiguous | 0.4285 | ambiguous | -0.766 | Destabilizing | 0.767 | D | 0.397 | neutral | D | 0.587174312 | None | None | N |
D/F | 0.8177 | likely_pathogenic | 0.8344 | pathogenic | 0.341 | Stabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
D/G | 0.4615 | ambiguous | 0.5148 | ambiguous | -0.622 | Destabilizing | 0.998 | D | 0.777 | deleterious | D | 0.664272619 | None | None | N |
D/H | 0.5559 | ambiguous | 0.5812 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.592735546 | None | None | N |
D/I | 0.736 | likely_pathogenic | 0.7653 | pathogenic | 0.919 | Stabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
D/K | 0.8339 | likely_pathogenic | 0.8475 | pathogenic | -0.194 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
D/L | 0.7752 | likely_pathogenic | 0.795 | pathogenic | 0.919 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
D/M | 0.853 | likely_pathogenic | 0.873 | pathogenic | 1.385 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
D/N | 0.2447 | likely_benign | 0.2641 | benign | -0.879 | Destabilizing | 0.999 | D | 0.789 | deleterious | D | 0.592806985 | None | None | N |
D/P | 0.9751 | likely_pathogenic | 0.9823 | pathogenic | 0.573 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
D/Q | 0.7287 | likely_pathogenic | 0.7574 | pathogenic | -0.612 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
D/R | 0.8715 | likely_pathogenic | 0.8904 | pathogenic | -0.125 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
D/S | 0.3775 | ambiguous | 0.4149 | ambiguous | -1.118 | Destabilizing | 0.997 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/T | 0.6525 | likely_pathogenic | 0.6889 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
D/V | 0.5379 | ambiguous | 0.5715 | pathogenic | 0.573 | Stabilizing | 0.999 | D | 0.866 | deleterious | D | 0.639138116 | None | None | N |
D/W | 0.9608 | likely_pathogenic | 0.9678 | pathogenic | 0.473 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
D/Y | 0.3952 | ambiguous | 0.406 | ambiguous | 0.589 | Stabilizing | 1.0 | D | 0.875 | deleterious | D | 0.638936311 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.